BLASTX nr result
ID: Glycyrrhiza23_contig00024235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00024235 (652 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7... 76 6e-12 gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn... 72 7e-11 emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera] 67 2e-09 emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 4e-06 >emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7268308|emb|CAB78602.1| hypothetical protein [Arabidopsis thaliana] Length = 655 Score = 75.9 bits (185), Expect = 6e-12 Identities = 33/92 (35%), Positives = 54/92 (58%) Frame = -3 Query: 281 FIMNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFV 102 F+MN + WNCRG F ++ + +++ ++ L ETH+ G + ++ GF QF Sbjct: 506 FMMNCLLWNCRGPNKPIFRRSIRYVLKKFDTDVLALFETHAGGDRAGRICQRLGFENQFR 565 Query: 101 VEARGHSGGIWCLWEVSLWKVEVLESSNQFAH 6 V+A G S G+W LW S+ VE++ S++QF H Sbjct: 566 VDAVGQSSGLWLLWRSSVGNVEIVSSTSQFIH 597 >gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis] Length = 464 Score = 72.4 bits (176), Expect = 7e-11 Identities = 30/90 (33%), Positives = 51/90 (56%) Frame = -3 Query: 275 MNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVE 96 MN + WNCRG F ++ + ++++ ++ L ETH+ G + + GF F V+ Sbjct: 1 MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVD 60 Query: 95 ARGHSGGIWCLWEVSLWKVEVLESSNQFAH 6 G SGG+W LW+ + +V ++ SS+QF H Sbjct: 61 VVGQSGGLWLLWKAEVGEVTIVNSSSQFIH 90 >emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera] Length = 833 Score = 67.4 bits (163), Expect = 2e-09 Identities = 32/88 (36%), Positives = 49/88 (55%) Frame = -3 Query: 266 MAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVEARG 87 + WNCRG F +KDL + + S++ LLE SG + + +K+ GFSGQ+ ++ G Sbjct: 670 LCWNCRGAGELKFMRAIKDLIKLHEPSIVVLLEPKISGGDADQVIKEIGFSGQYHIDPEG 729 Query: 86 HSGGIWCLWEVSLWKVEVLESSNQFAHL 3 + GIW LW+ + EV S+ HL Sbjct: 730 FAHGIWILWQTEDVRAEVTSSTPHQIHL 757 >emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1378 Score = 56.6 bits (135), Expect = 4e-06 Identities = 28/73 (38%), Positives = 41/73 (56%) Frame = -3 Query: 275 MNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVE 96 + M WN +G K +L++L R + +++ L+ETH SG + + GFSGQ VE Sbjct: 3 IKIMVWNVQGVGTK--LTILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRVE 60 Query: 95 ARGHSGGIWCLWE 57 A G GGIW W+ Sbjct: 61 AEGFRGGIWLFWK 73