BLASTX nr result

ID: Glycyrrhiza23_contig00024235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024235
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    76   6e-12
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    72   7e-11
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    67   2e-09
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   4e-06

>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 33/92 (35%), Positives = 54/92 (58%)
 Frame = -3

Query: 281 FIMNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFV 102
           F+MN + WNCRG     F   ++ + +++   ++ L ETH+ G    +  ++ GF  QF 
Sbjct: 506 FMMNCLLWNCRGPNKPIFRRSIRYVLKKFDTDVLALFETHAGGDRAGRICQRLGFENQFR 565

Query: 101 VEARGHSGGIWCLWEVSLWKVEVLESSNQFAH 6
           V+A G S G+W LW  S+  VE++ S++QF H
Sbjct: 566 VDAVGQSSGLWLLWRSSVGNVEIVSSTSQFIH 597


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 30/90 (33%), Positives = 51/90 (56%)
 Frame = -3

Query: 275 MNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVE 96
           MN + WNCRG     F   ++ + ++++  ++ L ETH+ G    +  +  GF   F V+
Sbjct: 1   MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVD 60

Query: 95  ARGHSGGIWCLWEVSLWKVEVLESSNQFAH 6
             G SGG+W LW+  + +V ++ SS+QF H
Sbjct: 61  VVGQSGGLWLLWKAEVGEVTIVNSSSQFIH 90


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = -3

Query: 266 MAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVEARG 87
           + WNCRG     F   +KDL + +  S++ LLE   SG +  + +K+ GFSGQ+ ++  G
Sbjct: 670 LCWNCRGAGELKFMRAIKDLIKLHEPSIVVLLEPKISGGDADQVIKEIGFSGQYHIDPEG 729

Query: 86  HSGGIWCLWEVSLWKVEVLESSNQFAHL 3
            + GIW LW+    + EV  S+    HL
Sbjct: 730 FAHGIWILWQTEDVRAEVTSSTPHQIHL 757


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = -3

Query: 275 MNFMAWNCRGTAAKGFSGLLKDLRREYSASLMFLLETHSSGPNCLKQVKKTGFSGQFVVE 96
           +  M WN +G   K    +L++L R  + +++ L+ETH SG    +   + GFSGQ  VE
Sbjct: 3   IKIMVWNVQGVGTK--LTILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRVE 60

Query: 95  ARGHSGGIWCLWE 57
           A G  GGIW  W+
Sbjct: 61  AEGFRGGIWLFWK 73


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