BLASTX nr result

ID: Glycyrrhiza23_contig00024215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024215
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago ...    62   6e-08
gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK...    59   5e-07
gb|AFK37542.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucu...    55   6e-06
ref|XP_004142975.1| PREDICTED: RNA-binding protein 48-like [Cucu...    55   6e-06

>ref|XP_003616248.1| hypothetical protein MTR_5g077780 [Medicago truncatula]
           gi|355517583|gb|AES99206.1| hypothetical protein
           MTR_5g077780 [Medicago truncatula]
          Length = 222

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +3

Query: 6   VRDKLDKIQSSGEHLQTGSASKKARVDNRRRI 101
           VRDKLDKIQSSGEHLQ GS SKKARVDNRRRI
Sbjct: 191 VRDKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222


>gb|ACJ85604.1| unknown [Medicago truncatula] gi|388492174|gb|AFK34153.1| unknown
           [Medicago truncatula] gi|388516031|gb|AFK46077.1|
           unknown [Medicago truncatula]
          Length = 222

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +3

Query: 6   VRDKLDKIQSSGEHLQTGSASKKARVDNRRRI 101
           VR KLDKIQSSGEHLQ GS SKKARVDNRRRI
Sbjct: 191 VRAKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222


>gb|AFK37542.1| unknown [Lotus japonicus]
          Length = 222

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +3

Query: 6   VRDKLDKIQSSGEHLQTGSASKKARVDNRRRI 101
           VRDKLDKIQSSGEHLQ G  SKK+RVDNRRRI
Sbjct: 191 VRDKLDKIQSSGEHLQDGPVSKKSRVDNRRRI 222


>ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucumis sativus]
          Length = 258

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 6   VRDKLDKIQSSGEHLQTGSASKKARVDNRRRI 101
           VR+KLDKIQSS EHLQ G ASKK+R+DNRRRI
Sbjct: 227 VREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258


>ref|XP_004142975.1| PREDICTED: RNA-binding protein 48-like [Cucumis sativus]
          Length = 258

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 6   VRDKLDKIQSSGEHLQTGSASKKARVDNRRRI 101
           VR+KLDKIQSS EHLQ G ASKK+R+DNRRRI
Sbjct: 227 VREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258


Top