BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024214
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   147   2e-33
ref|XP_003538661.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   145   9e-33
ref|XP_003592771.1| U4/U6 small nuclear ribonucleoprotein Prp3 [...   127   3e-27
ref|XP_003555627.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   104   2e-20
emb|CBI25311.3| unnamed protein product [Vitis vinifera]               79   1e-12

>ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
           max]
          Length = 832

 Score =  147 bits (372), Expect = 2e-33
 Identities = 94/169 (55%), Positives = 104/169 (61%)
 Frame = +1

Query: 334 GSKGRSKVKRDEDEREDSPEQRXXXXXXXKRKDREHSEDREFEDKRIRVSDDTTKEGKRE 513
           GSK R KV RDE  RED  E R       KRK+REHSEDR++EDK+IRVS++  KEG+RE
Sbjct: 65  GSKDRLKVNRDEG-REDLVEPRLSSHSH-KRKEREHSEDRDYEDKKIRVSEER-KEGRRE 121

Query: 514 RRKFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSHGSASAKDTASVQN 693
           RRKFGD                                      G+HGSAS+ DTA +QN
Sbjct: 122 RRKFGDKVKKEEEEEDGNDNIRGIHEAKVKEEV---------ADGAHGSASSNDTAFIQN 172

Query: 694 GTALGSPAVAPTSVPETSLASSPSFPIKVSSISTTNENKGVSITRSHEV 840
           G ALGSPAVAP SVPETSLA    FPIKVSS STTNENKGVSI RSHEV
Sbjct: 173 G-ALGSPAVAPMSVPETSLAPPSCFPIKVSSNSTTNENKGVSIIRSHEV 220


>ref|XP_003538661.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
           max]
          Length = 851

 Score =  145 bits (367), Expect = 9e-33
 Identities = 92/169 (54%), Positives = 104/169 (61%)
 Frame = +1

Query: 334 GSKGRSKVKRDEDEREDSPEQRXXXXXXXKRKDREHSEDREFEDKRIRVSDDTTKEGKRE 513
           GSK R K K DE  RED  E R       KRK+REHSEDR++EDK+IR+S++  KEG+RE
Sbjct: 105 GSKVRLKGKHDEG-REDLVEPRLSSHSH-KRKEREHSEDRDYEDKKIRISEER-KEGRRE 161

Query: 514 RRKFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSHGSASAKDTASVQN 693
           RRKFGD                                    T G+HGSAS+  T  +QN
Sbjct: 162 RRKFGDKVKEEV------------------------------TDGAHGSASSNGTVFIQN 191

Query: 694 GTALGSPAVAPTSVPETSLASSPSFPIKVSSISTTNENKGVSITRSHEV 840
           G ALGSPAVAP SVPETSLA  PS PIKVSS STTNENKG+SITRSHEV
Sbjct: 192 G-ALGSPAVAPMSVPETSLAPPPSVPIKVSSNSTTNENKGISITRSHEV 239


>ref|XP_003592771.1| U4/U6 small nuclear ribonucleoprotein Prp3 [Medicago truncatula]
           gi|355481819|gb|AES63022.1| U4/U6 small nuclear
           ribonucleoprotein Prp3 [Medicago truncatula]
          Length = 794

 Score =  127 bits (319), Expect = 3e-27
 Identities = 87/169 (51%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
 Frame = +1

Query: 334 GSKGRSKVKRDEDEREDSPEQRXXXXXXXKRKDREHSEDREFEDKRIRVSDDTTKEGKRE 513
           GSKGRSK KRDE EREDS E+        KRKDREHSEDRE +DKRIRVS     E K+E
Sbjct: 64  GSKGRSKSKRDE-EREDSLER----YSSHKRKDREHSEDRELDDKRIRVS-----EAKKE 113

Query: 514 RRKFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSHGSASAKDTA-SVQ 690
           RR+FGD                                    T+G      +KD+  S+ 
Sbjct: 114 RRRFGDKVKKEDDYYDNEARVKEEV-----------------TNGD-----SKDSIDSLH 151

Query: 691 NGTALGSPAVAPTSVPETSLASSPSFPIKVSSISTTNENKGVSITRSHE 837
           NG A+GSPAV P SV  TSLA  PSFPIKVSSI+TTNENKGVS  RSHE
Sbjct: 152 NGVAVGSPAVVPASVAVTSLAPPPSFPIKVSSITTTNENKGVSNNRSHE 200


>ref|XP_003555627.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
           max]
          Length = 801

 Score =  104 bits (260), Expect = 2e-20
 Identities = 78/165 (47%), Positives = 86/165 (52%)
 Frame = +1

Query: 346 RSKVKRDEDEREDSPEQRXXXXXXXKRKDREHSEDREFEDKRIRVSDDTTKEGKRERRKF 525
           RSKVKRDE ERE S           KRK+REHSED +F D +IRVSD+     +RERRKF
Sbjct: 59  RSKVKRDE-EREYSHSH--------KRKEREHSEDMDFLDNKIRVSDE-----RRERRKF 104

Query: 526 GDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSHGSASAKDTASVQNGTAL 705
           GD                                            + KDTAS+QNG AL
Sbjct: 105 GDKVKKEEDDAEEEDGGDNVRAVHEAKVKEEV-------------TNFKDTASLQNG-AL 150

Query: 706 GSPAVAPTSVPETSLASSPSFPIKVSSISTTNENKGVSITRSHEV 840
           GSPA  P   PETSL    S PIKVSS  TTNENKG+SITRSHEV
Sbjct: 151 GSPASVP---PETSLTPPSSIPIKVSSNFTTNENKGLSITRSHEV 192


>emb|CBI25311.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 63/177 (35%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
 Frame = +1

Query: 346 RSKVKRDEDEREDSPEQRXXXXXXXKRKDREHSEDR-EFEDKRIRVSDDTTKEGKRERRK 522
           R +   +E +RE   E+        KRK+R  SEDR +  +KRIRVS +     +RERR+
Sbjct: 98  RDRAADEEVKREREGERSHDSAHSHKRKERGESEDRGDGGEKRIRVSTE-----RRERRR 152

Query: 523 FGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSH-----------GSASA 669
           F D                                     +              G A++
Sbjct: 153 FEDRVEDVKESNGVERRERRKFEDRVKEEDLGGFDEVKNVNFDEKSVKKEESEELGDAAS 212

Query: 670 KDTASVQNGTALGSPAVAPTSVPETSLASSPSFPIKVSSISTTNENKGVSITRSHEV 840
             + S+ NG       +AP  VPETSLA S   P KVSSISTTNENKGVSITRSHEV
Sbjct: 213 NGSGSIGNGVVPEPLNMAPRLVPETSLAPSLPPPTKVSSISTTNENKGVSITRSHEV 269