BLASTX nr result

ID: Glycyrrhiza23_contig00024213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024213
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520488.1| PREDICTED: F-box protein At2g26850-like [Gly...   102   4e-20
ref|XP_003520490.1| PREDICTED: F-box protein At2g32560-like [Gly...    79   9e-16
gb|AFK35889.1| unknown [Lotus japonicus]                               86   4e-15
ref|XP_003624984.1| F-box protein [Medicago truncatula] gi|35549...    67   5e-15
gb|ABD33044.1| Cyclin-like F-box [Medicago truncatula]                 67   5e-15

>ref|XP_003520488.1| PREDICTED: F-box protein At2g26850-like [Glycine max]
          Length = 321

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%)
 Frame = +1

Query: 16  LLKCTRIYVYTVMMPLSANDSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVF 195
           + K T ++ Y  ++   + DS TDTF +RSPT GGWRMIEGN++ DRLR +  ET P  F
Sbjct: 154 VFKITNLFCYDAIV---SYDSRTDTFKSRSPT-GGWRMIEGNIQRDRLRLAPAETSPMTF 209

Query: 196 YMSNCLNDLKPGDHIEIQKKNRKELPY 276
           YMSN +NDLKPGDHIEIQ + RKE PY
Sbjct: 210 YMSNSMNDLKPGDHIEIQIRRRKESPY 236


>ref|XP_003520490.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 307

 Score = 79.3 bits (194), Expect(2) = 9e-16
 Identities = 34/68 (50%), Positives = 48/68 (70%)
 Frame = +1

Query: 73  DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252
           DS TD F  R     GW+++  N++WD+LR   V+T P V Y+S+CL DLKPGDHIE+Q 
Sbjct: 152 DSKTDNFQARQQN-AGWKIMGNNIQWDKLRAPPVDTLPSVRYVSDCLQDLKPGDHIELQW 210

Query: 253 KNRKELPY 276
           K+ +++PY
Sbjct: 211 KSSRDIPY 218



 Score = 28.9 bits (63), Expect(2) = 9e-16
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 6   FWFPAQVYKNIRLYCYDALV 65
           FWFPAQ+Y+   LY  DALV
Sbjct: 132 FWFPAQIYRG--LYFRDALV 149


>gb|AFK35889.1| unknown [Lotus japonicus]
          Length = 317

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/86 (54%), Positives = 56/86 (65%)
 Frame = +1

Query: 19  LKCTRIYVYTVMMPLSANDSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFY 198
           LK   +Y Y V++   + +S TDTF  RSP    WRMI  N+ WDRLR S  E F   FY
Sbjct: 155 LKRMPLYFYDVIV---SYNSETDTFRARSPNNE-WRMIGRNIEWDRLRSSPAENFSRKFY 210

Query: 199 MSNCLNDLKPGDHIEIQKKNRKELPY 276
           MSN  NDLKPGDHIEIQ++ R+E PY
Sbjct: 211 MSN-KNDLKPGDHIEIQRRKRRECPY 235


>ref|XP_003624984.1| F-box protein [Medicago truncatula] gi|355499999|gb|AES81202.1|
           F-box protein [Medicago truncatula]
          Length = 353

 Score = 67.0 bits (162), Expect(2) = 5e-15
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = +1

Query: 73  DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252
           DS TDTF TR P  G  R+IE ++ WD LR    +T+   +Y  N LN+LKPGDHIEIQK
Sbjct: 198 DSRTDTFQTRCPY-GRKRLIERDISWDMLRMPPPKTYLVDYYEYNDLNNLKPGDHIEIQK 256

Query: 253 KNRKELP 273
           + R+  P
Sbjct: 257 RGRRLFP 263



 Score = 38.5 bits (88), Expect(2) = 5e-15
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 2/24 (8%)
 Frame = +3

Query: 3   RFWFPAQVYKN--IRLYCYDALVS 68
           RFWFPAQVYK   + L+CYDA+VS
Sbjct: 173 RFWFPAQVYKATLLTLHCYDAIVS 196


>gb|ABD33044.1| Cyclin-like F-box [Medicago truncatula]
          Length = 330

 Score = 67.0 bits (162), Expect(2) = 5e-15
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = +1

Query: 73  DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252
           DS TDTF TR P  G  R+IE ++ WD LR    +T+   +Y  N LN+LKPGDHIEIQK
Sbjct: 175 DSRTDTFQTRCPY-GRKRLIERDISWDMLRMPPPKTYLVDYYEYNDLNNLKPGDHIEIQK 233

Query: 253 KNRKELP 273
           + R+  P
Sbjct: 234 RGRRLFP 240



 Score = 38.5 bits (88), Expect(2) = 5e-15
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 2/24 (8%)
 Frame = +3

Query: 3   RFWFPAQVYKN--IRLYCYDALVS 68
           RFWFPAQVYK   + L+CYDA+VS
Sbjct: 150 RFWFPAQVYKATLLTLHCYDAIVS 173


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