BLASTX nr result
ID: Glycyrrhiza23_contig00024213
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00024213 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003520488.1| PREDICTED: F-box protein At2g26850-like [Gly... 102 4e-20 ref|XP_003520490.1| PREDICTED: F-box protein At2g32560-like [Gly... 79 9e-16 gb|AFK35889.1| unknown [Lotus japonicus] 86 4e-15 ref|XP_003624984.1| F-box protein [Medicago truncatula] gi|35549... 67 5e-15 gb|ABD33044.1| Cyclin-like F-box [Medicago truncatula] 67 5e-15 >ref|XP_003520488.1| PREDICTED: F-box protein At2g26850-like [Glycine max] Length = 321 Score = 102 bits (253), Expect = 4e-20 Identities = 51/87 (58%), Positives = 63/87 (72%) Frame = +1 Query: 16 LLKCTRIYVYTVMMPLSANDSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVF 195 + K T ++ Y ++ + DS TDTF +RSPT GGWRMIEGN++ DRLR + ET P F Sbjct: 154 VFKITNLFCYDAIV---SYDSRTDTFKSRSPT-GGWRMIEGNIQRDRLRLAPAETSPMTF 209 Query: 196 YMSNCLNDLKPGDHIEIQKKNRKELPY 276 YMSN +NDLKPGDHIEIQ + RKE PY Sbjct: 210 YMSNSMNDLKPGDHIEIQIRRRKESPY 236 >ref|XP_003520490.1| PREDICTED: F-box protein At2g32560-like [Glycine max] Length = 307 Score = 79.3 bits (194), Expect(2) = 9e-16 Identities = 34/68 (50%), Positives = 48/68 (70%) Frame = +1 Query: 73 DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252 DS TD F R GW+++ N++WD+LR V+T P V Y+S+CL DLKPGDHIE+Q Sbjct: 152 DSKTDNFQARQQN-AGWKIMGNNIQWDKLRAPPVDTLPSVRYVSDCLQDLKPGDHIELQW 210 Query: 253 KNRKELPY 276 K+ +++PY Sbjct: 211 KSSRDIPY 218 Score = 28.9 bits (63), Expect(2) = 9e-16 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 6 FWFPAQVYKNIRLYCYDALV 65 FWFPAQ+Y+ LY DALV Sbjct: 132 FWFPAQIYRG--LYFRDALV 149 >gb|AFK35889.1| unknown [Lotus japonicus] Length = 317 Score = 85.5 bits (210), Expect = 4e-15 Identities = 47/86 (54%), Positives = 56/86 (65%) Frame = +1 Query: 19 LKCTRIYVYTVMMPLSANDSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFY 198 LK +Y Y V++ + +S TDTF RSP WRMI N+ WDRLR S E F FY Sbjct: 155 LKRMPLYFYDVIV---SYNSETDTFRARSPNNE-WRMIGRNIEWDRLRSSPAENFSRKFY 210 Query: 199 MSNCLNDLKPGDHIEIQKKNRKELPY 276 MSN NDLKPGDHIEIQ++ R+E PY Sbjct: 211 MSN-KNDLKPGDHIEIQRRKRRECPY 235 >ref|XP_003624984.1| F-box protein [Medicago truncatula] gi|355499999|gb|AES81202.1| F-box protein [Medicago truncatula] Length = 353 Score = 67.0 bits (162), Expect(2) = 5e-15 Identities = 35/67 (52%), Positives = 44/67 (65%) Frame = +1 Query: 73 DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252 DS TDTF TR P G R+IE ++ WD LR +T+ +Y N LN+LKPGDHIEIQK Sbjct: 198 DSRTDTFQTRCPY-GRKRLIERDISWDMLRMPPPKTYLVDYYEYNDLNNLKPGDHIEIQK 256 Query: 253 KNRKELP 273 + R+ P Sbjct: 257 RGRRLFP 263 Score = 38.5 bits (88), Expect(2) = 5e-15 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 2/24 (8%) Frame = +3 Query: 3 RFWFPAQVYKN--IRLYCYDALVS 68 RFWFPAQVYK + L+CYDA+VS Sbjct: 173 RFWFPAQVYKATLLTLHCYDAIVS 196 >gb|ABD33044.1| Cyclin-like F-box [Medicago truncatula] Length = 330 Score = 67.0 bits (162), Expect(2) = 5e-15 Identities = 35/67 (52%), Positives = 44/67 (65%) Frame = +1 Query: 73 DSTTDTFWTRSPTRGGWRMIEGNVRWDRLRFSQVETFPGVFYMSNCLNDLKPGDHIEIQK 252 DS TDTF TR P G R+IE ++ WD LR +T+ +Y N LN+LKPGDHIEIQK Sbjct: 175 DSRTDTFQTRCPY-GRKRLIERDISWDMLRMPPPKTYLVDYYEYNDLNNLKPGDHIEIQK 233 Query: 253 KNRKELP 273 + R+ P Sbjct: 234 RGRRLFP 240 Score = 38.5 bits (88), Expect(2) = 5e-15 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 2/24 (8%) Frame = +3 Query: 3 RFWFPAQVYKN--IRLYCYDALVS 68 RFWFPAQVYK + L+CYDA+VS Sbjct: 150 RFWFPAQVYKATLLTLHCYDAIVS 173