BLASTX nr result

ID: Glycyrrhiza23_contig00024212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024212
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40613.1| unknown [Medicago truncatula]                          114   6e-24
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...   114   6e-24
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   110   2e-22
ref|XP_003612607.1| Replication protein A1-like protein [Medicag...    98   6e-19
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...    97   1e-18

>gb|AFK40613.1| unknown [Medicago truncatula]
          Length = 341

 Score =  114 bits (286), Expect = 6e-24
 Identities = 69/134 (51%), Positives = 83/134 (61%)
 Frame = +2

Query: 2   DLIGEPVPAPRDIPAQSFRGGPIGRNQAAHHYRSDQLPQSGFPLMGPFFREEKQEGKVTM 181
           DLIG+P PAP++ PA S          AA H  + Q               E    K  M
Sbjct: 106 DLIGKPDPAPKEAPALS----------AASHAGNVQSAAGQL---------ESTAEKAVM 146

Query: 182 GVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQQGML 361
            VNLTQGAIM MC   F SE+++PVLQVIDL L+Q   +S T+ YQLVLSDGSHY+QG L
Sbjct: 147 AVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTL 203

Query: 362 AVQKNELVHSGRLQ 403
           +VQKN+L+HSGRLQ
Sbjct: 204 SVQKNKLIHSGRLQ 217



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = +2

Query: 179 MGVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQQGM 358
           M VNLTQGAI+ MC   F SE+L PVLQ IDL  VQ   +SA E YQL LSDG HY+ GM
Sbjct: 1   MAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYEHGM 57

Query: 359 LAVQKNELVHSGRLQ 403
           LA QKNELVH+GRLQ
Sbjct: 58  LAKQKNELVHNGRLQ 72


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score =  114 bits (286), Expect = 6e-24
 Identities = 69/134 (51%), Positives = 83/134 (61%)
 Frame = +2

Query: 2   DLIGEPVPAPRDIPAQSFRGGPIGRNQAAHHYRSDQLPQSGFPLMGPFFREEKQEGKVTM 181
           DLIG+P PAP++ PA S          AA H  + Q               E    K  M
Sbjct: 473 DLIGKPDPAPKEAPALS----------AASHAGNVQSAAGQL---------ESTAEKAVM 513

Query: 182 GVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQQGML 361
            VNLTQGAIM MC   F SE+++PVLQVIDL L+Q   +S T+ YQLVLSDGSHY+QG L
Sbjct: 514 AVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTL 570

Query: 362 AVQKNELVHSGRLQ 403
           +VQKN+L+HSGRLQ
Sbjct: 571 SVQKNKLIHSGRLQ 584



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/78 (65%), Positives = 57/78 (73%)
 Frame = +2

Query: 170 KVTMGVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQ 349
           +  M VNLTQGAI+ MC   F SE+L PVLQ IDL  VQ   +SA E YQL LSDG HY+
Sbjct: 365 QAVMAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYE 421

Query: 350 QGMLAVQKNELVHSGRLQ 403
            GMLA QKNELVH+GRLQ
Sbjct: 422 HGMLAKQKNELVHNGRLQ 439


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/75 (77%), Positives = 62/75 (82%)
 Frame = +2

Query: 179 MGVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQQGM 358
           M VNLTQGAI+TMC   F SEDL PVLQVIDL LVQ   +S TERY++VLSDG HYQQGM
Sbjct: 1   MAVNLTQGAIVTMC---FTSEDLHPVLQVIDLKLVQSQQNSGTERYRVVLSDGLHYQQGM 57

Query: 359 LAVQKNELVHSGRLQ 403
           LA QKNELVHSGRLQ
Sbjct: 58  LATQKNELVHSGRLQ 72


>ref|XP_003612607.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513942|gb|AES95565.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 147

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +2

Query: 152 EEKQEGKVTMGVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLS 331
           E     K  M VNLTQGAI+TMC   F SE  +PVLQV D+ LVQ   ++ TE Y+LVLS
Sbjct: 5   EVNNREKTVMAVNLTQGAIITMC---FTSEVWEPVLQVFDMKLVQSQQNNTTEPYRLVLS 61

Query: 332 DGSHYQQGMLAVQKNELVHSGRLQ 403
           DG +YQQGML VQKN LVHSGRLQ
Sbjct: 62  DGLYYQQGMLVVQKNHLVHSGRLQ 85


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/75 (68%), Positives = 59/75 (78%)
 Frame = +2

Query: 179 MGVNLTQGAIMTMCDQNFFSEDLKPVLQVIDLNLVQLLHHSATERYQLVLSDGSHYQQGM 358
           M V+LTQ AIM MC  N   E L+PVLQVI+L LVQ   +S  ERY+LVLSDGSHYQQGM
Sbjct: 1   MAVSLTQSAIMEMCSANC-PEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGM 59

Query: 359 LAVQKNELVHSGRLQ 403
           LA QKN+LVH+G+LQ
Sbjct: 60  LATQKNDLVHAGKLQ 74


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