BLASTX nr result

ID: Glycyrrhiza23_contig00024211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024211
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   115   3e-24
gb|AFK40613.1| unknown [Medicago truncatula]                          114   1e-23
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...   114   1e-23
ref|XP_003612607.1| Replication protein A1-like protein [Medicag...   112   2e-23
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   100   9e-20

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/76 (80%), Positives = 65/76 (85%)
 Frame = -2

Query: 228 MGVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQQGM 49
           M VNLTQGAI+TMC   FTSE L PVLQVIDL LVQSQQ+  TE YR++LSDG HYQQGM
Sbjct: 1   MAVNLTQGAIVTMC---FTSEDLHPVLQVIDLKLVQSQQNSGTERYRVVLSDGLHYQQGM 57

Query: 48  LATQKNELVHSGRLQK 1
           LATQKNELVHSGRLQK
Sbjct: 58  LATQKNELVHSGRLQK 73


>gb|AFK40613.1| unknown [Medicago truncatula]
          Length = 341

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/135 (50%), Positives = 83/135 (61%)
 Frame = -2

Query: 405 DLIGEPVAAPKDIPAQSFRGGPIGRNEALHHSRSNQLPQSGFPPVGPFFWEVKQEGKVTM 226
           DLIG+P  APK+ PA S          A  H+ + Q                    K  M
Sbjct: 106 DLIGKPDPAPKEAPALS----------AASHAGNVQSAAGQLESTAE---------KAVM 146

Query: 225 GVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQQGML 46
            VNLTQGAIM MC   FTSE ++PVLQVIDL L+QSQQ+  T+ Y+L+LSDGSHY+QG L
Sbjct: 147 AVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTL 203

Query: 45  ATQKNELVHSGRLQK 1
           + QKN+L+HSGRLQK
Sbjct: 204 SVQKNKLIHSGRLQK 218



 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/76 (71%), Positives = 59/76 (77%)
 Frame = -2

Query: 228 MGVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQQGM 49
           M VNLTQGAI+ MC   FTSE L PVLQ IDL  VQSQQ+ A E Y+L LSDG HY+ GM
Sbjct: 1   MAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYEHGM 57

Query: 48  LATQKNELVHSGRLQK 1
           LA QKNELVH+GRLQK
Sbjct: 58  LAKQKNELVHNGRLQK 73


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/135 (50%), Positives = 83/135 (61%)
 Frame = -2

Query: 405 DLIGEPVAAPKDIPAQSFRGGPIGRNEALHHSRSNQLPQSGFPPVGPFFWEVKQEGKVTM 226
           DLIG+P  APK+ PA S          A  H+ + Q                    K  M
Sbjct: 473 DLIGKPDPAPKEAPALS----------AASHAGNVQSAAGQLESTAE---------KAVM 513

Query: 225 GVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQQGML 46
            VNLTQGAIM MC   FTSE ++PVLQVIDL L+QSQQ+  T+ Y+L+LSDGSHY+QG L
Sbjct: 514 AVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTL 570

Query: 45  ATQKNELVHSGRLQK 1
           + QKN+L+HSGRLQK
Sbjct: 571 SVQKNKLIHSGRLQK 585



 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/79 (68%), Positives = 60/79 (75%)
 Frame = -2

Query: 237 KVTMGVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQ 58
           +  M VNLTQGAI+ MC   FTSE L PVLQ IDL  VQSQQ+ A E Y+L LSDG HY+
Sbjct: 365 QAVMAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYE 421

Query: 57  QGMLATQKNELVHSGRLQK 1
            GMLA QKNELVH+GRLQK
Sbjct: 422 HGMLAKQKNELVHNGRLQK 440


>ref|XP_003612607.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513942|gb|AES95565.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 147

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/86 (68%), Positives = 66/86 (76%)
 Frame = -2

Query: 258 WEVKQEGKVTMGVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLL 79
           +EV    K  M VNLTQGAI+TMC   FTSEV +PVLQV D+ LVQSQQ+  TE YRL+L
Sbjct: 4   FEVNNREKTVMAVNLTQGAIITMC---FTSEVWEPVLQVFDMKLVQSQQNNTTEPYRLVL 60

Query: 78  SDGSHYQQGMLATQKNELVHSGRLQK 1
           SDG +YQQGML  QKN LVHSGRLQK
Sbjct: 61  SDGLYYQQGMLVVQKNHLVHSGRLQK 86


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = -2

Query: 228 MGVNLTQGAIMTMCNGVFTSEVLKPVLQVIDLNLVQSQQHIATESYRLLLSDGSHYQQGM 49
           M V+LTQ AIM MC+     E L+PVLQVI+L LVQSQQ+   E YRL+LSDGSHYQQGM
Sbjct: 1   MAVSLTQSAIMEMCSAN-CPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGM 59

Query: 48  LATQKNELVHSGRLQK 1
           LATQKN+LVH+G+LQK
Sbjct: 60  LATQKNDLVHAGKLQK 75