BLASTX nr result

ID: Glycyrrhiza23_contig00024201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024201
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795...   246   3e-63
ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...   190   2e-46
ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis ...   189   3e-46
ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis t...   184   1e-44
ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial ...   183   2e-44

>ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795433 [Glycine max]
          Length = 1156

 Score =  246 bits (627), Expect = 3e-63
 Identities = 131/202 (64%), Positives = 154/202 (76%)
 Frame = -1

Query: 611 ASSEELDPVSLSSLASFMSIALPLVPPGAIAAVKAHEAAGVMVALLAREGEGLGVSTLKA 432
           A+   LDPV+LS+L SFM+IALPLVPPG IAA+K+HEAA +++  LAREGEG+GV+ ++A
Sbjct: 67  AAEAALDPVALSALVSFMAIALPLVPPGGIAALKSHEAAAILIVALAREGEGVGVACVRA 126

Query: 431 AVKCVGVLIGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCAQESLEKFFVSLKSSTVIK 252
            VKC+GVLIGFCDLEDWD I+LGFETLLKFSI KRPKVRRCAQES+EK F S+KSSTV K
Sbjct: 127 MVKCLGVLIGFCDLEDWDGIRLGFETLLKFSICKRPKVRRCAQESVEKVFKSIKSSTVTK 186

Query: 251 EASKLVLSELKSCIDLTMKLIASRTVDENKDNGSLKQDXXXXXXXXXXXXLTAPNLSAKV 72
           EASK VLSELKSC  L +KL A  T DE K++  LK +            L AP LSA+V
Sbjct: 187 EASKFVLSELKSCSALALKLNALSTSDECKEDKVLKHEHLEVLHLLNLINLIAPYLSAEV 246

Query: 71  IPKVLCEVHKLFGSQFSPLTRH 6
           I KVL EV KLF  +FS L RH
Sbjct: 247 ILKVLSEVRKLFSFKFSELARH 268


>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score =  190 bits (483), Expect = 2e-46
 Identities = 105/202 (51%), Positives = 135/202 (66%)
 Frame = -1

Query: 608 SSEELDPVSLSSLASFMSIALPLVPPGAIAAVKAHEAAGVMVALLAREGEGLGVSTLKAA 429
           SSE LD   +++L++ +S+ LP VP  AI   KA EA  V+V LL   GEG+  S+L+A 
Sbjct: 76  SSETLDTTGIAALSTLLSMVLPAVPAQAITHPKAVEAVSVLVELLRSRGEGMAASSLRAV 135

Query: 428 VKCVGVLIGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCAQESLEKFFVSLKSSTVIKE 249
           VKC+GVL+GFCDLEDWDS+ LGFETLLKFS+DKRPKVR+CAQ  LE+ F S +S+TV KE
Sbjct: 136 VKCLGVLVGFCDLEDWDSVSLGFETLLKFSVDKRPKVRKCAQAFLERVFKSFQSTTVTKE 195

Query: 248 ASKLVLSELKSCIDLTMKLIASRTVDENKDNGSLKQDXXXXXXXXXXXXLTAPNLSAKVI 69
           ASKLVLS  KS + L ++L + +TVD +      K +            L  P LS KV 
Sbjct: 196 ASKLVLSLFKSYMPLAVRLNSLKTVDGS------KPENLEILHMLGVLKLIVPYLSVKVG 249

Query: 68  PKVLCEVHKLFGSQFSPLTRHV 3
            K+L E+ KL  +QFS LTRH+
Sbjct: 250 LKILLELLKLMNAQFSALTRHI 271


>ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1149

 Score =  189 bits (481), Expect = 3e-46
 Identities = 107/203 (52%), Positives = 138/203 (67%)
 Frame = -1

Query: 614 AASSEELDPVSLSSLASFMSIALPLVPPGAIAAVKAHEAAGVMVALLAREGEGLGVSTLK 435
           A++S+ LDP +LS+L SF++IALPLVPPG I+A  A EAAGV+V LL  +   L VST++
Sbjct: 83  ASASDTLDPTALSALLSFLAIALPLVPPGGISAPNASEAAGVLVVLLGMKN--LTVSTVR 140

Query: 434 AAVKCVGVLIGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCAQESLEKFFVSLKSSTVI 255
           AAVKC+G+L+GFC+LEDW S++LGF+TLLKFS+D+RPKVRRCAQESL  F  SLK S + 
Sbjct: 141 AAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVRRCAQESLITFLNSLKHSAIK 200

Query: 254 KEASKLVLSELKSCIDLTMKLIASRTVDENKDNGSLKQDXXXXXXXXXXXXLTAPNLSAK 75
           K+AS LV S LKSC+   +KL  S  VD   ++                  LT P LS +
Sbjct: 201 KQASSLVFSLLKSCMPSAVKLSTSTPVDGPGEDKQSHAQHLDVLHKLNVIILTIPLLSKR 260

Query: 74  VIPKVLCEVHKLFGSQFSPLTRH 6
           V  K+L E+ KL   QFS +T H
Sbjct: 261 VRFKMLKELIKLVSPQFSIVTAH 283


>ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis thaliana]
           gi|332659373|gb|AEE84773.1| NUC173 domain-containing
           protein [Arabidopsis thaliana]
          Length = 1131

 Score =  184 bits (466), Expect = 1e-44
 Identities = 103/207 (49%), Positives = 138/207 (66%), Gaps = 1/207 (0%)
 Frame = -1

Query: 620 STAASSEELDPVSLSSLASFMSIALPLVPPGAIAAVKAHEAAGVMVALLAREGEGLGVST 441
           S+  SS E DPV++S+L +F+SI +PLVP G I+A  A +A  V+V  +  EG  LGV++
Sbjct: 71  SSVDSSTE-DPVAVSALLTFLSIVVPLVPSGEISATMARDAVAVLVKPIEEEGTKLGVAS 129

Query: 440 LKAAVKCVG-VLIGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCAQESLEKFFVSLKSS 264
           L+A VKC+G +LIGFCDL DW+S+++GF  LLKF+IDKRPKVRRCAQE LEK F SL+SS
Sbjct: 130 LRAGVKCIGTLLIGFCDLNDWESLQIGFALLLKFAIDKRPKVRRCAQECLEKLFGSLRSS 189

Query: 263 TVIKEASKLVLSELKSCIDLTMKLIASRTVDENKDNGSLKQDXXXXXXXXXXXXLTAPNL 84
           TVIKEAS  V + LK    +   L +++  + +K + +LK +             T P L
Sbjct: 190 TVIKEASNTVYALLKEYKPVLSDLSSTKIEEGSKVDSTLKSENAEAAHVLNVLSATIPFL 249

Query: 83  SAKVIPKVLCEVHKLFGSQFSPLTRHV 3
           SAKV  +V  E+  L  SQFSPLTR +
Sbjct: 250 SAKVSSRVFSELCGLMASQFSPLTRQI 276


>ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial [Cucumis sativus]
          Length = 426

 Score =  183 bits (465), Expect = 2e-44
 Identities = 105/203 (51%), Positives = 136/203 (66%)
 Frame = -1

Query: 614 AASSEELDPVSLSSLASFMSIALPLVPPGAIAAVKAHEAAGVMVALLAREGEGLGVSTLK 435
           A++S+ LDP +LS+L SF++IALPLV PG I+A  A EAAGV+V LL  +   L VST++
Sbjct: 83  ASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASEAAGVLVVLLGMKN--LTVSTVR 140

Query: 434 AAVKCVGVLIGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCAQESLEKFFVSLKSSTVI 255
           AAVKC+G+L+GFC+LEDW S++LGF+TLLKFS+D+RPKVRRCAQESL  F  SLK S + 
Sbjct: 141 AAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVRRCAQESLITFLNSLKHSAIK 200

Query: 254 KEASKLVLSELKSCIDLTMKLIASRTVDENKDNGSLKQDXXXXXXXXXXXXLTAPNLSAK 75
           K+AS LV S LKSC+   +KL     VD   ++                  LT P LS +
Sbjct: 201 KQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQHLDVLHKLNVIILTIPLLSKR 260

Query: 74  VIPKVLCEVHKLFGSQFSPLTRH 6
           V  K+L E+ KL   QFS +T H
Sbjct: 261 VRFKMLKELIKLVSPQFSIVTAH 283


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