BLASTX nr result

ID: Glycyrrhiza23_contig00024175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024175
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold,...   148   4e-34
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       141   6e-32
gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   135   4e-30
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   134   8e-30
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   134   8e-30

>gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold, putative
           [Medicago truncatula]
          Length = 188

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/110 (65%), Positives = 88/110 (80%)
 Frame = -1

Query: 331 LISWCSKKQPPIFRSSIEAEYRVLAATTCEIQWVTYLLQDLQLPFIRPSLLYCDSLSGRH 152
           LI+W SKK+  + +SS E E+R LAATTCEIQW+TY ++DLQ+ F  P+LLY DS S RH
Sbjct: 55  LITWRSKKRAAVSKSSSETEHRALAATTCEIQWLTYRIRDLQVSFTSPALLYRDSQSARH 114

Query: 151 IAANPSFHERTKHIELDCHFVREKLQQKLF*LLPISSSNQLADCFTKPLD 2
           IA+NP+FHE TKHI++DCHFV EKLQ  LF LLPI+S NQLAD FTK L+
Sbjct: 115 IASNPTFHECTKHIDIDCHFVCEKLQAHLFHLLPITSINQLADFFTKQLE 164


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/109 (57%), Positives = 85/109 (77%)
 Frame = -1

Query: 331 LISWCSKKQPPIFRSSIEAEYRVLAATTCEIQWVTYLLQDLQLPFIRPSLLYCDSLSGRH 152
           LI W +KKQP + +SS EAEYR +A+ TCE+QW+ YLL+DLQ+  ++  +LYCD+ S  H
Sbjct: 480 LICWRTKKQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQVQCVQLPVLYCDNQSAMH 539

Query: 151 IAANPSFHERTKHIELDCHFVREKLQQKLF*LLPISSSNQLADCFTKPL 5
           IA+NP FHERTKH+E+DCH VREKLQ  +F LLP+++ +Q+ D FTK L
Sbjct: 540 IASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGDSFTKAL 588


>gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-type;
           Retrotransposon gag protein, putative [Medicago
           truncatula]
          Length = 120

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/108 (62%), Positives = 79/108 (73%)
 Frame = -1

Query: 328 ISWCSKKQPPIFRSSIEAEYRVLAATTCEIQWVTYLLQDLQLPFIRPSLLYCDSLSGRHI 149
           ISW +KKQP I RSSIEAEYR LA  + E+QW+ YLL DL +   +P  +YCDS +  HI
Sbjct: 7   ISWKTKKQPTISRSSIEAEYRSLATLSSELQWLKYLLSDLGIYHPQPITIYCDSQAAIHI 66

Query: 148 AANPSFHERTKHIELDCHFVREKLQQKLF*LLPISSSNQLADCFTKPL 5
           A NP FHERTKHIE+DCHFVREK++  L     I SS+QLAD FTKPL
Sbjct: 67  AENPVFHERTKHIEIDCHFVREKIKSSLITASYIRSSDQLADIFTKPL 114


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/107 (58%), Positives = 79/107 (73%)
 Frame = -1

Query: 325  SWCSKKQPPIFRSSIEAEYRVLAATTCEIQWVTYLLQDLQLPFIRPSLLYCDSLSGRHIA 146
            SW SKKQ  + RSS EAEYR LA+ TCE+QW+ YL +DL +   +P  +YCD+ S  ++A
Sbjct: 1560 SWKSKKQSTVARSSSEAEYRALASLTCELQWLQYLFKDLHISLDQPISVYCDNKSAIYLA 1619

Query: 145  ANPSFHERTKHIELDCHFVREKLQQKLF*LLPISSSNQLADCFTKPL 5
             NP FHERTKHIE+DCH +REK+Q  L  LLP+SS+ QLAD  TKPL
Sbjct: 1620 HNPIFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPL 1666


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = -1

Query: 331  LISWCSKKQPPIFRSSIEAEYRVLAATTCEIQWVTYLLQDLQLPFIRPSLLYCDSLSGRH 152
            LISW +K+Q  +  SS EAEYR +  T CE+ W+  LL+DL++   +P+LLYCD+ +  H
Sbjct: 1193 LISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRSLLKDLRILHPKPALLYCDNTTALH 1252

Query: 151  IAANPSFHERTKHIELDCHFVREKLQQKLF*LLPISSSNQLADCFTKPL 5
            IAANP FHERT+HIE+DCHF+REK+Q   F    I+S+NQLAD FTKPL
Sbjct: 1253 IAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIASTNQLADVFTKPL 1301