BLASTX nr result

ID: Glycyrrhiza23_contig00024147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024147
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...   196   5e-92
gb|AFK38005.1| unknown [Medicago truncatula]                          186   1e-89
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         189   9e-88
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   181   1e-86
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   181   5e-86

>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max]
          Length = 252

 Score =  196 bits (497), Expect(2) = 5e-92
 Identities = 92/102 (90%), Positives = 98/102 (96%)
 Frame = +2

Query: 476 VIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGDPIKITASGWQARI 655
           VI+NPKLEKK KRTALFFEGCLSVDGFRAVVER+LDVEVTGLDRYG PIKI ASGWQARI
Sbjct: 151 VILNPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARI 210

Query: 656 LQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 781
           LQHECDHLDG +YVDKM+PRTFRTVDN+DLPLA+GCPKLGPR
Sbjct: 211 LQHECDHLDGTLYVDKMLPRTFRTVDNMDLPLAQGCPKLGPR 252



 Score =  169 bits (428), Expect(2) = 5e-92
 Identities = 86/102 (84%), Positives = 91/102 (89%)
 Frame = +3

Query: 156 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMIRVMRKAPGV 335
           WFLGL  D KK  NLP+TVKAGDPVLHEPAQ+V P+EIKSE+VQKIIDDMI+VMRKAPGV
Sbjct: 50  WFLGLGADSKKT-NLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGV 108

Query: 336 GLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 461
           GLAAPQIGIP RIIVLEDTKEYISY  KEE K QDRRPFDLL
Sbjct: 109 GLAAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLL 150


>gb|AFK38005.1| unknown [Medicago truncatula]
          Length = 267

 Score =  186 bits (473), Expect(2) = 1e-89
 Identities = 88/102 (86%), Positives = 96/102 (94%)
 Frame = +2

Query: 476 VIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGDPIKITASGWQARI 655
           VI+NPKL+  SKRTALFFEGCLSVDGFRAVVER+LDVEVTGLDR G+ IKITASGWQARI
Sbjct: 166 VILNPKLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGEQIKITASGWQARI 225

Query: 656 LQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 781
           LQHECDHLDG +YVDKMVPRTFRTV+N+DLPLA+GCP LGPR
Sbjct: 226 LQHECDHLDGTLYVDKMVPRTFRTVENMDLPLAQGCPNLGPR 267



 Score =  170 bits (431), Expect(2) = 1e-89
 Identities = 98/155 (63%), Positives = 110/155 (70%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   VLLIFVAKNSLFKLPTATP--LCRFTVXXXXXXXXXXXXXXXXXXXXXXXXWFLGLTED- 179
           +L +   KNSLF L T TP  L  F+                         +F G T+D 
Sbjct: 12  ILPLSRTKNSLFTLQTTTPFSLSPFS-KPPPLTLTLSSSSSQNATIRTRAGFFFGRTKDD 70

Query: 180 -KKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQI 356
            KKKKM+LP+TVKAGDPVLHEPAQEV PSEI S+KVQKIIDDMIRVMRKAPGVGLAAPQI
Sbjct: 71  KKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMIRVMRKAPGVGLAAPQI 130

Query: 357 GIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 461
           G+ SRIIVLEDT+E+ISYAPKE +KAQDR PFDLL
Sbjct: 131 GVSSRIIVLEDTEEFISYAPKEVLKAQDRHPFDLL 165


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  189 bits (480), Expect(2) = 9e-88
 Identities = 88/102 (86%), Positives = 94/102 (92%)
 Frame = +2

Query: 476 VIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGDPIKITASGWQARI 655
           VI+NPKLEKKS RTA FFEGCLSVDGFRAVVERYLDVEVTGL RYG PIK+ ASGWQARI
Sbjct: 173 VILNPKLEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQPIKVNASGWQARI 232

Query: 656 LQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 781
           LQHECDHLDG +YVDKMVPRTFRT++NLDLPLA+GCP LG R
Sbjct: 233 LQHECDHLDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274



 Score =  161 bits (408), Expect(2) = 9e-88
 Identities = 81/102 (79%), Positives = 88/102 (86%)
 Frame = +3

Query: 156 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMIRVMRKAPGV 335
           WFLGL E  KKK + P+ VKAGDPVLHEPA+EV P EI SE++QKIIDDMI+ MR APGV
Sbjct: 73  WFLGLGE--KKKTSFPDIVKAGDPVLHEPAREVDPEEIGSERIQKIIDDMIKAMRMAPGV 130

Query: 336 GLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 461
           GLAAPQIG+P RIIVLEDTKEYI YAPKEE KAQDRRPFDLL
Sbjct: 131 GLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDRRPFDLL 172


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  181 bits (458), Expect(2) = 1e-86
 Identities = 88/109 (80%), Positives = 96/109 (88%)
 Frame = +2

Query: 455 SFVLLRQVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGDPIKITA 634
           SF LL  VI+NPKL+ KS +TALFFEGCLSVDGFRAVVERYLDVEV G DR G+PIK+ A
Sbjct: 161 SFDLL--VIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDA 218

Query: 635 SGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 781
           SGWQARILQHECDHLDG +YVDKMVPRTFRT +NL LPLA+GCPKLG R
Sbjct: 219 SGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267



 Score =  166 bits (421), Expect(2) = 1e-86
 Identities = 87/102 (85%), Positives = 90/102 (88%)
 Frame = +3

Query: 156 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMIRVMRKAPGV 335
           WFLGL E  +KKM+LP  VKAGDPVLHEPA+EV P EI SEKVQKIIDDMI  MRKAPGV
Sbjct: 66  WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGV 123

Query: 336 GLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 461
           GLAAPQIGIP RIIVLEDTKEYISYAPKEEIKAQDRR FDLL
Sbjct: 124 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLL 165


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  181 bits (458), Expect(2) = 5e-86
 Identities = 88/109 (80%), Positives = 96/109 (88%)
 Frame = +2

Query: 455 SFVLLRQVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGDPIKITA 634
           SF LL  VI+NPKL+ KS +TALFFEGCLSVDGFRAVVERYLDVEV G DR G+PIK+ A
Sbjct: 161 SFDLL--VIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDA 218

Query: 635 SGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 781
           SGWQARILQHECDHLDG +YVDKMVPRTFRT +NL LPLA+GCPKLG R
Sbjct: 219 SGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267



 Score =  164 bits (415), Expect(2) = 5e-86
 Identities = 86/102 (84%), Positives = 89/102 (87%)
 Frame = +3

Query: 156 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMIRVMRKAPGV 335
           WFLGL E  +KKM+LP  VKAGDPVLHEPA+EV P EI SEKV KIIDDMI  MRKAPGV
Sbjct: 66  WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVXKIIDDMILTMRKAPGV 123

Query: 336 GLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 461
           GLAAPQIGIP RIIVLEDTKEYISYAPKEEIKAQDRR FDLL
Sbjct: 124 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLL 165


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