BLASTX nr result

ID: Glycyrrhiza23_contig00024141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024141
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541716.1| PREDICTED: transmembrane protein 184C-like [...   126   2e-27
ref|XP_003527968.1| PREDICTED: transmembrane protein 184C-like [...   125   4e-27
ref|XP_003544743.1| PREDICTED: transmembrane protein 184C-like [...   124   6e-27
ref|XP_002302193.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002278084.1| PREDICTED: transmembrane protein 184C [Vitis...   117   1e-24

>ref|XP_003541716.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 484

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/79 (79%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   GVAAVVHLYVFPATPYKRGERCVRNVAVMANYASLGSPPDPEEIRDSERSTRIWLGGGRH 180
           GVAAVVHLYVFPA PYK+GERCVRNVAVM +YASLGSP DPEE++DS+RSTR WLG   +
Sbjct: 306 GVAAVVHLYVFPAEPYKKGERCVRNVAVMDDYASLGSPLDPEEVQDSQRSTRTWLGAHNN 365

Query: 181 EREK-PMKFTHSVRDVVVG 234
           EREK PMKFT SV DVVVG
Sbjct: 366 EREKRPMKFTQSVCDVVVG 384


>ref|XP_003527968.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 485

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/79 (79%), Positives = 71/79 (89%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   GVAAVVHLYVFPATPYKRGERCVRNVAVMANYASLGSPPDPEEIRDSERSTRIWLGGGRH 180
           GVAAVVHLYVFPA PYKRGERCVRNVAVM +YASLGSPPDP E++DSERSTR+ L  GRH
Sbjct: 306 GVAAVVHLYVFPAVPYKRGERCVRNVAVMTDYASLGSPPDPAEVQDSERSTRMRL--GRH 363

Query: 181 -EREKPMKFTHSVRDVVVG 234
            +RE+ MKFTH+VRDVV+G
Sbjct: 364 DDRERRMKFTHNVRDVVLG 382


>ref|XP_003544743.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 484

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
 Frame = +1

Query: 4   VAAVVHLYVFPATPYKRGERCVRNVAVMANYASLGSPPDPEEIRDSERSTRIWLGGGRHE 183
           VAAVVHLYVFPA PYK GERC+RNVAVM +YASLGSP DPEE++DS+RSTR WLG   ++
Sbjct: 307 VAAVVHLYVFPAEPYKMGERCIRNVAVMDDYASLGSPLDPEEVQDSQRSTRTWLGAHNNQ 366

Query: 184 REK-PMKFTHSVRDVVVG 234
           REK PMKFT SVRDVVVG
Sbjct: 367 REKNPMKFTQSVRDVVVG 384


>ref|XP_002302193.1| predicted protein [Populus trichocarpa] gi|222843919|gb|EEE81466.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   GVAAVVHLYVFPATPYKRGERCVRNVAVMANYASLGSPPDPEEIRDSERSTRIWLGGGRH 180
           G+AA+VHLYVFP+ PYKRGERCVRNVAVM +YASLG+PPDPEE+RD ERSTR+ L  GRH
Sbjct: 306 GIAAIVHLYVFPSVPYKRGERCVRNVAVMTDYASLGAPPDPEEVRDCERSTRVRL--GRH 363

Query: 181 -EREKPMKFTHSVRDVVVG 234
            EREK + F  SVRDVV G
Sbjct: 364 DEREKRLNFPQSVRDVVFG 382


>ref|XP_002278084.1| PREDICTED: transmembrane protein 184C [Vitis vinifera]
           gi|302142772|emb|CBI19975.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/79 (77%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   GVAAVVHLYVFPATPYKRGERCVRNVAVMANYASLGSPPDPEEIRDSERSTRIWLGGGRH 180
           GVAAVVHLYVFPA PY+RGERCVRNVAVMA+YASL +PPDPEE+RD ERSTRI L   RH
Sbjct: 306 GVAAVVHLYVFPAVPYQRGERCVRNVAVMADYASLDTPPDPEEVRDCERSTRIRL--ARH 363

Query: 181 -EREKPMKFTHSVRDVVVG 234
            EREK + F  SVRDVV+G
Sbjct: 364 DEREKRLNFPQSVRDVVLG 382


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