BLASTX nr result

ID: Glycyrrhiza23_contig00024127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024127
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago t...   258   5e-67
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   251   4e-65
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   226   1e-57
emb|CBI37639.3| unnamed protein product [Vitis vinifera]              226   1e-57
ref|XP_003538913.1| PREDICTED: uncharacterized protein LOC100780...   224   4e-57

>ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
           gi|355513703|gb|AES95326.1| MutL DNA mismatch repair
           protein [Medicago truncatula]
          Length = 1293

 Score =  258 bits (658), Expect = 5e-67
 Identities = 131/152 (86%), Positives = 140/152 (92%), Gaps = 7/152 (4%)
 Frame = -1

Query: 438 MASIRPLPEAVRSSVRSGFSLFDLTRVVEELVYNSLDARATKVSVFVSIGSCYLKVVDDG 259
           MA++RPLPE+VRSS+RS FSLFD TR+VEELVYNSLDARATKVSVFV IGSCYLKVVDDG
Sbjct: 1   MATVRPLPESVRSSIRSAFSLFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDG 60

Query: 258 SGITRDGLELVGERY-------ATSKFLNLADLNATNGNFGFRGEALASISEVSLLEIVT 100
            GITRDGLELVGERY       ATSKFLNLADLNAT+ NFGFRGEALASISEVSLLEIVT
Sbjct: 61  GGITRDGLELVGERYGVYSFNFATSKFLNLADLNATSENFGFRGEALASISEVSLLEIVT 120

Query: 99  RAYGRPNGYRKVLKGCKCLHLGIDDNRKEVGT 4
           RAYGRPNGYRKVLKGCKC++LGIDD+RKEVGT
Sbjct: 121 RAYGRPNGYRKVLKGCKCIYLGIDDDRKEVGT 152


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  251 bits (641), Expect = 4e-65
 Identities = 128/145 (88%), Positives = 135/145 (93%)
 Frame = -1

Query: 438 MASIRPLPEAVRSSVRSGFSLFDLTRVVEELVYNSLDARATKVSVFVSIGSCYLKVVDDG 259
           MASI+PLPEAVRSS+RSG  LFD TRVVEELV+NSLDARATKVSVFVS  SCYLKVVDDG
Sbjct: 1   MASIKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSTRSCYLKVVDDG 60

Query: 258 SGITRDGLELVGERYATSKFLNLADLNATNGNFGFRGEALASISEVSLLEIVTRAYGRPN 79
           SGI RD LELVGERYATSKFLNL DLNAT+ NFGFRGEALASISEVSLLEIVT+ YGRPN
Sbjct: 61  SGIPRDELELVGERYATSKFLNLVDLNATSENFGFRGEALASISEVSLLEIVTKTYGRPN 120

Query: 78  GYRKVLKGCKCLHLGIDDNRKEVGT 4
           GYRKVLKGCKCL+LGIDD+RKEVGT
Sbjct: 121 GYRKVLKGCKCLYLGIDDDRKEVGT 145


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  226 bits (577), Expect = 1e-57
 Identities = 110/145 (75%), Positives = 130/145 (89%)
 Frame = -1

Query: 438 MASIRPLPEAVRSSVRSGFSLFDLTRVVEELVYNSLDARATKVSVFVSIGSCYLKVVDDG 259
           M SI+PLPEAV SSVRSG  LFDLTRVVEEL+YNSLDA ATKVSV VS+G+CY+KVVDDG
Sbjct: 1   MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60

Query: 258 SGITRDGLELVGERYATSKFLNLADLNATNGNFGFRGEALASISEVSLLEIVTRAYGRPN 79
           +G+TRDGL L+GERYATSK  +L +++A  G+FGFRGEAL SIS+VSLLEIVT+  GRPN
Sbjct: 61  TGVTRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRPN 120

Query: 78  GYRKVLKGCKCLHLGIDDNRKEVGT 4
           GYRKV+KGCKCL+LGIDD+R++VGT
Sbjct: 121 GYRKVMKGCKCLYLGIDDDRQDVGT 145


>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  226 bits (577), Expect = 1e-57
 Identities = 110/145 (75%), Positives = 130/145 (89%)
 Frame = -1

Query: 438 MASIRPLPEAVRSSVRSGFSLFDLTRVVEELVYNSLDARATKVSVFVSIGSCYLKVVDDG 259
           M SI+PLPEAV SSVRSG  LFDLTRVVEEL+YNSLDA ATKVSV VS+G+CY+KVVDDG
Sbjct: 1   MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60

Query: 258 SGITRDGLELVGERYATSKFLNLADLNATNGNFGFRGEALASISEVSLLEIVTRAYGRPN 79
           +G+TRDGL L+GERYATSK  +L +++A  G+FGFRGEAL SIS+VSLLEIVT+  GRPN
Sbjct: 61  TGVTRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRPN 120

Query: 78  GYRKVLKGCKCLHLGIDDNRKEVGT 4
           GYRKV+KGCKCL+LGIDD+R++VGT
Sbjct: 121 GYRKVMKGCKCLYLGIDDDRQDVGT 145


>ref|XP_003538913.1| PREDICTED: uncharacterized protein LOC100780255 [Glycine max]
          Length = 806

 Score =  224 bits (572), Expect = 4e-57
 Identities = 119/152 (78%), Positives = 130/152 (85%), Gaps = 7/152 (4%)
 Frame = -1

Query: 438 MASIRPLPEAVRSSVRSGFSLFDLTRVVEELVYNSLDARATK-------VSVFVSIGSCY 280
           MASI+ L EAVRSS+RSG  L D TRVVEELV+NSLDARATK       VSVFVS GSCY
Sbjct: 1   MASIKLLSEAVRSSLRSGIFLVDFTRVVEELVFNSLDARATKGETEKLKVSVFVSTGSCY 60

Query: 279 LKVVDDGSGITRDGLELVGERYATSKFLNLADLNATNGNFGFRGEALASISEVSLLEIVT 100
           LKVVDDGSGI RDG+E+VGERYATSKFLNL DLNA++ NFGFRGE LASISEVSLLEIVT
Sbjct: 61  LKVVDDGSGIPRDGMEMVGERYATSKFLNLVDLNASSENFGFRGEVLASISEVSLLEIVT 120

Query: 99  RAYGRPNGYRKVLKGCKCLHLGIDDNRKEVGT 4
           + YGRPNGYR   KGCKCL+LGIDD+RKE+GT
Sbjct: 121 KTYGRPNGYR---KGCKCLYLGIDDDRKEMGT 149


Top