BLASTX nr result

ID: Glycyrrhiza23_contig00024108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024108
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998...   196   3e-48
ref|XP_003607665.1| Cyclin d2 [Medicago truncatula] gi|355508720...   186   2e-45
ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]         168   5e-40
gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                168   7e-40
ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998|gb|AES73201.1| Cyclin
           d2 [Medicago truncatula]
          Length = 362

 Score =  196 bits (497), Expect = 3e-48
 Identities = 95/130 (73%), Positives = 106/130 (81%), Gaps = 7/130 (5%)
 Frame = -3

Query: 373 MAPSFDCVSSLLCSEDSNSVFDDGHYGGTVTME---DTWRPRYHQQFGGDN----PDGLP 215
           MAPSFDCVSSLLC+E+ +SVFDD  YGG  ++E   D+WRPR   Q         PD LP
Sbjct: 1   MAPSFDCVSSLLCTEEDSSVFDDAEYGGGGSVEVYGDSWRPRNDHQMTQQRYDGVPDELP 60

Query: 214 LQSEECLVMMVEKECQQWPGADYLNRLQCGDLDFVARKEVIDWIEKVRAHFGFGPLCAYL 35
           LQSEECLV+M+EKECQQWPGADYLN+L+ GDLDF AR EVIDWI+KVRAHFGFGPLCAYL
Sbjct: 61  LQSEECLVLMLEKECQQWPGADYLNKLRFGDLDFEARNEVIDWIQKVRAHFGFGPLCAYL 120

Query: 34  SINYMDRFLS 5
           SINYMDRFLS
Sbjct: 121 SINYMDRFLS 130


>ref|XP_003607665.1| Cyclin d2 [Medicago truncatula] gi|355508720|gb|AES89862.1| Cyclin
           d2 [Medicago truncatula]
          Length = 342

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/126 (71%), Positives = 103/126 (81%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373 MAPSFDCVSSLLCSEDSNSVFDDGHYGGTVT-MEDTWRPRYHQQFGG-DNPDGLPLQSEE 200
           M PSFDCV+SLLC+E+ +SVFDD  YGG++   ED W PR  Q+ GG  N   LPLQSEE
Sbjct: 1   MEPSFDCVASLLCTEEDSSVFDDVEYGGSMEDYEDLWHPRNEQRSGGVPNELHLPLQSEE 60

Query: 199 CLVMMVEKECQQWPGADYLNRLQCGDLDFVARKEVIDWIEKVRAHFGFGPLCAYLSINYM 20
           CLV+M+EKECQQW GADYLNRL+ GDLDF AR E IDWI+KV++HFGFGPLC YLSINYM
Sbjct: 61  CLVLMLEKECQQWHGADYLNRLKFGDLDFGARNEAIDWIQKVQSHFGFGPLCVYLSINYM 120

Query: 19  DRFLSA 2
           DRFLSA
Sbjct: 121 DRFLSA 126


>ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 355

 Score =  168 bits (426), Expect = 5e-40
 Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 7/131 (5%)
 Frame = -3

Query: 373 MAPSFDCVSSLLCSEDSNSVFDDGHYGGTV-TMEDTWR-PRYHQQFGG----DNPDGL-P 215
           MAPSFDCVSSLLC+ED NS+FD+  YGG+V  +ED W+ PRY +        D P+G  P
Sbjct: 1   MAPSFDCVSSLLCAED-NSIFDENDYGGSVEVLEDAWQDPRYRRNLSQSENLDVPNGFFP 59

Query: 214 LQSEECLVMMVEKECQQWPGADYLNRLQCGDLDFVARKEVIDWIEKVRAHFGFGPLCAYL 35
           LQS+ECL +MVEKE    P  DY+NRL+ GDLDF ARKE IDWIEKV+ HFGFGPLCAYL
Sbjct: 60  LQSDECLRLMVEKEWDHLPNGDYVNRLRSGDLDFGARKEAIDWIEKVQQHFGFGPLCAYL 119

Query: 34  SINYMDRFLSA 2
           SINY+DRFLSA
Sbjct: 120 SINYLDRFLSA 130


>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score =  168 bits (425), Expect = 7e-40
 Identities = 87/130 (66%), Positives = 98/130 (75%), Gaps = 6/130 (4%)
 Frame = -3

Query: 373 MAPSFDC-VSSLLCSEDSNSVFDDG-HYGGTVT-MEDTWRPRYHQ---QFGGDNPDGLPL 212
           MAPSFDC VS+LLC+ED+NS+FDD  HY  TV   E TW    HQ   Q GG +   LP+
Sbjct: 1   MAPSFDCAVSNLLCAEDNNSIFDDNDHYDATVEEFEATWHHGNHQICNQNGGGDGGCLPM 60

Query: 211 QSEECLVMMVEKECQQWPGADYLNRLQCGDLDFVARKEVIDWIEKVRAHFGFGPLCAYLS 32
           QS+ECLV+MVEKECQ  P  DYL RL+ GDLD  ARKE +DWI KV AHFGFGPLCAYLS
Sbjct: 61  QSDECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGPLCAYLS 120

Query: 31  INYMDRFLSA 2
           INY+DRFLSA
Sbjct: 121 INYLDRFLSA 130


>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  160 bits (406), Expect = 1e-37
 Identities = 83/127 (65%), Positives = 94/127 (74%), Gaps = 3/127 (2%)
 Frame = -3

Query: 373 MAPSFDC-VSSLLCSEDSNSVFDDGH-YGGTVT-MEDTWRPRYHQQFGGDNPDGLPLQSE 203
           MAPSFDC VSSLLC+ED+NS+FDD   Y  TV   E TW    HQ    ++   LP+QSE
Sbjct: 1   MAPSFDCTVSSLLCAEDNNSIFDDNDCYDATVEEFEATWHHGNHQIQNQNSGWWLPMQSE 60

Query: 202 ECLVMMVEKECQQWPGADYLNRLQCGDLDFVARKEVIDWIEKVRAHFGFGPLCAYLSINY 23
           ECLV+MVEKECQ  P  DYL RL+ GDL   ARKE +DWI KV AHFGFGPLCAYLS+NY
Sbjct: 61  ECLVLMVEKECQHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNAHFGFGPLCAYLSVNY 120

Query: 22  MDRFLSA 2
           +DRFLSA
Sbjct: 121 LDRFLSA 127


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