BLASTX nr result

ID: Glycyrrhiza23_contig00024104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024104
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   126   2e-27
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   122   3e-26
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   113   1e-23
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   109   2e-22
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...   109   2e-22

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  126 bits (317), Expect = 2e-27
 Identities = 53/135 (39%), Positives = 81/135 (60%)
 Frame = +3

Query: 9    MEEFTNVEAFKVTADWGKLWRLDVPPKVKTFLWRSCRDCLPTRVRLRTRGVDCSSICVVC 188
            + +  ++   +   +W  LW L VPPKVKTFLWRSCR+ LPTRVRL+ RGV+C+  C +C
Sbjct: 1402 LSQHVDLSTHRCDGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALC 1461

Query: 189  NADLETTWHSLLTCPSAKECWEQLSLWSYIDEQLLQCENFRELFFALNSTLDANQLKSFA 368
              + E + H    C  +++CW+QL LWS + ++     +F    F +   LD++Q   +A
Sbjct: 1462 ENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWA 1521

Query: 369  MTLWSSWSKRNAILW 413
              +WS W +RN  +W
Sbjct: 1522 CVMWSIWKQRNDCIW 1536


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +3

Query: 3   LCMEEFTNVEAFKVTADWGKLWRLDVPPKVKTFLWRSCRDCLPTRVRLRTRGVDCSSICV 182
           +C+E+  N    +    W  +WRL VPP+VK  +WR CR+C PTRVRL +RGV+C S CV
Sbjct: 39  VCVEDVVNNAHLRKPGYWSGIWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACV 98

Query: 183 VCNADLETTWHSLLTCPSAKECWEQLSLWSYIDEQLLQCENFRELFFALNSTLDANQLKS 362
            C    E  +H    C +A + W   ++W  I   L Q +N  ++ F L   L A+Q++S
Sbjct: 99  KCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMES 158

Query: 363 FAMTLWSSWSKRNAILWE 416
               +WS W  RN  LW+
Sbjct: 159 IVTIMWSIWKSRNLKLWQ 176


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/125 (40%), Positives = 75/125 (60%)
 Frame = +3

Query: 39  KVTADWGKLWRLDVPPKVKTFLWRSCRDCLPTRVRLRTRGVDCSSICVVCNADLETTWHS 218
           +V ++W  +WRL +PPKVK FLWR+CR+CLPTR+RL+++GV C   C VC+   E + H 
Sbjct: 361 RVPSNWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHL 420

Query: 219 LLTCPSAKECWEQLSLWSYIDEQLLQCENFRELFFALNSTLDANQLKSFAMTLWSSWSKR 398
              C  +   W+++ LWS +        +F    FA+   LD  Q + F++TLWS W  R
Sbjct: 421 FFMCSKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHR 480

Query: 399 NAILW 413
           N  +W
Sbjct: 481 NNKVW 485


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/138 (36%), Positives = 71/138 (51%)
 Frame = +3

Query: 3   LCMEEFTNVEAFKVTADWGKLWRLDVPPKVKTFLWRSCRDCLPTRVRLRTRGVDCSSICV 182
           LC+EE  +    +    W  +WRL VPPK+K F+WR CR  LPTR +LR +GV C   CV
Sbjct: 151 LCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACV 210

Query: 183 VCNADLETTWHSLLTCPSAKECWEQLSLWSYIDEQLLQCENFRELFFALNSTLDANQLKS 362
            C+   E   H    C    + W+   LWS I + ++  +    + F L       Q + 
Sbjct: 211 NCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQI 270

Query: 363 FAMTLWSSWSKRNAILWE 416
           F +T+WS W +RN  +WE
Sbjct: 271 F-VTMWSLWKRRNLKVWE 287


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/138 (36%), Positives = 71/138 (51%)
 Frame = +3

Query: 3   LCMEEFTNVEAFKVTADWGKLWRLDVPPKVKTFLWRSCRDCLPTRVRLRTRGVDCSSICV 182
           LC+EE  +    +    W  +WRL VPPK+K F+WR CR  LPTR +LR +GV C   CV
Sbjct: 244 LCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACV 303

Query: 183 VCNADLETTWHSLLTCPSAKECWEQLSLWSYIDEQLLQCENFRELFFALNSTLDANQLKS 362
            C+   E   H    C    + W+   LWS I + ++  +    + F L       Q + 
Sbjct: 304 NCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQI 363

Query: 363 FAMTLWSSWSKRNAILWE 416
           F +T+WS W +RN  +WE
Sbjct: 364 F-VTMWSLWKRRNLKVWE 380


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