BLASTX nr result

ID: Glycyrrhiza23_contig00024100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024100
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520292.1| PREDICTED: ATP-dependent zinc metalloproteas...    95   2e-21
ref|NP_190662.2| cytochrome BC1 synthesis [Arabidopsis thaliana]...    86   2e-18
gb|AAM64718.1| BCS1 protein-like protein [Arabidopsis thaliana]        86   2e-18
gb|AAK43926.1|AF370607_1 putative mitochondrial protein [Arabido...    86   2e-18
ref|XP_003629399.1| Mitochondrial chaperone BCS1 [Medicago trunc...    96   4e-18

>ref|XP_003520292.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 1-like [Glycine
           max]
          Length = 498

 Score = 94.7 bits (234), Expect(2) = 2e-21
 Identities = 42/63 (66%), Positives = 54/63 (85%)
 Frame = +3

Query: 3   IEEFEGLVNNQIYEAAEAYLGTKITPSTNRLRVSKSDTENSFTLTMERNESVTDVFNGVK 182
           I+EF+GL+NNQIYEAAE YLG KI+P+T RL+VSK +T+ +F LTMERNES+TDVF  +K
Sbjct: 64  IDEFDGLLNNQIYEAAETYLGAKISPNTRRLKVSKPETDTTFALTMERNESLTDVFRSMK 123

Query: 183 LHW 191
            +W
Sbjct: 124 FNW 126



 Score = 32.3 bits (72), Expect(2) = 2e-21
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 193 HWVLVSRHVDDSRSFENPRDLNS 261
           +WVLV R V+ SR F NPRDLN+
Sbjct: 125 NWVLVCRQVE-SRGFHNPRDLNA 146


>ref|NP_190662.2| cytochrome BC1 synthesis [Arabidopsis thaliana]
           gi|18086343|gb|AAL57634.1| AT3g50930/F18B3_210
           [Arabidopsis thaliana] gi|27363216|gb|AAO11527.1|
           At3g50930/F18B3_210 [Arabidopsis thaliana]
           gi|332645207|gb|AEE78728.1| cytochrome BC1 synthesis
           [Arabidopsis thaliana]
          Length = 576

 Score = 85.5 bits (210), Expect(2) = 2e-18
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   IEEFEGLVNNQIYEAAEAYLGTKITPSTNRLRVSKSDTENSFTLTMERNESVTDVFNGVK 182
           IEEFEG  +N+++EAAEAYL TKI+PS  R++VSK + EN++ +T+ER+E V D +NGVK
Sbjct: 110 IEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVK 169

Query: 183 LHW 191
             W
Sbjct: 170 FQW 172



 Score = 31.6 bits (70), Expect(2) = 2e-18
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1

Query: 196 WVLVSRHVDDSRSFENPRDLNS 261
           W+L  RHV+ S+ F NPRDLNS
Sbjct: 172 WILHCRHVE-SKHFHNPRDLNS 192


>gb|AAM64718.1| BCS1 protein-like protein [Arabidopsis thaliana]
          Length = 534

 Score = 85.5 bits (210), Expect(2) = 2e-18
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   IEEFEGLVNNQIYEAAEAYLGTKITPSTNRLRVSKSDTENSFTLTMERNESVTDVFNGVK 182
           IEEFEG  +N+++EAAEAYL TKI+PS  R++VSK + EN++ +T+ER+E V D +NGVK
Sbjct: 68  IEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVK 127

Query: 183 LHW 191
             W
Sbjct: 128 FQW 130



 Score = 31.6 bits (70), Expect(2) = 2e-18
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1

Query: 196 WVLVSRHVDDSRSFENPRDLNS 261
           W+L  RHV+ S+ F NPRDLNS
Sbjct: 130 WILHCRHVE-SKHFHNPRDLNS 150


>gb|AAK43926.1|AF370607_1 putative mitochondrial protein [Arabidopsis thaliana]
           gi|4835244|emb|CAB42922.1| putative mitochondrial
           protein [Arabidopsis thaliana]
           gi|20856863|gb|AAM26687.1| AT3g50930/F18B3_210
           [Arabidopsis thaliana]
          Length = 534

 Score = 85.5 bits (210), Expect(2) = 2e-18
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   IEEFEGLVNNQIYEAAEAYLGTKITPSTNRLRVSKSDTENSFTLTMERNESVTDVFNGVK 182
           IEEFEG  +N+++EAAEAYL TKI+PS  R++VSK + EN++ +T+ER+E V D +NGVK
Sbjct: 68  IEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVK 127

Query: 183 LHW 191
             W
Sbjct: 128 FQW 130



 Score = 31.6 bits (70), Expect(2) = 2e-18
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1

Query: 196 WVLVSRHVDDSRSFENPRDLNS 261
           W+L  RHV+ S+ F NPRDLNS
Sbjct: 130 WILHCRHVE-SKHFHNPRDLNS 150


>ref|XP_003629399.1| Mitochondrial chaperone BCS1 [Medicago truncatula]
           gi|355523421|gb|AET03875.1| Mitochondrial chaperone BCS1
           [Medicago truncatula]
          Length = 500

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   IEEFEGLVNNQIYEAAEAYLGTKITPSTNRLRVSKSDTENSFTLTMERNESVTDVFNGVK 182
           IEEFEGL NNQIY AAE YLGT ++PST R R+SKSD + +FTLTMER++ VTD FNGVK
Sbjct: 72  IEEFEGLDNNQIYSAAETYLGTIVSPSTKRFRISKSDHQQTFTLTMERDQLVTDYFNGVK 131

Query: 183 LHW 191
           L W
Sbjct: 132 LKW 134


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