BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024092
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   189   3e-46
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   169   2e-40
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36

>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/104 (86%), Positives = 98/104 (94%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMPERNML 182
           NALIT YT+CGK +EARRVFD+MPV+DLVSWNAILSG VNARRIEEANS+FREMP R++L
Sbjct: 317 NALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLL 376

Query: 183 TWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           TWTVMISGLAQNG GEEGLKLFNQMKLEGLEPCDYA+AGAI SC
Sbjct: 377 TWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
 Frame = +3

Query: 3   NALITFYTKCGKT---------LEARRVFDRMPV--RDLVSWNAILSGYVNARRIEEANS 149
           NAL++ Y  C  +           AR++FD  P   RD  +W  I++GYV    +  A  
Sbjct: 170 NALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARE 229

Query: 150 VFREMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITS 311
           +   M +   + W  MISG    G  EE   L  +M   G++  +Y +   I++
Sbjct: 230 LLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISA 283


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/104 (84%), Positives = 98/104 (94%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMPERNML 182
           NALITFYTK  + +EARRVFD+MPVRD++SWNA+LSGYVNA+RIEEANS+F EMPERN+L
Sbjct: 330 NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVL 389

Query: 183 TWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           TWTVMISGLAQNG GEEGLKLFNQMK EGLEPCDYAFAGAIT+C
Sbjct: 390 TWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITAC 433



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMP--ERN 176
           N LI  Y K      AR++FD++P  D+V+   +LS Y ++  ++ A  +F   P   R+
Sbjct: 44  NRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRD 103

Query: 177 MLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITS 311
            +++  MI+  +    G   L LF QMK  G  P  + F+  +++
Sbjct: 104 TVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSA 148



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   NALITFYTKCGKT---------LEARRVFDRMPVRDLV--SWNAILSGYVNARRIEEANS 149
           NAL++ Y  C  +           AR+VFD  P   +   SW  +++GYV    +  A  
Sbjct: 179 NALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARE 238

Query: 150 VFREMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           +   +     + W  MISG  + GL EE    F +M   G++  +Y +   I++C
Sbjct: 239 LLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC 293



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/77 (36%), Positives = 44/77 (57%)
 Frame = +3

Query: 84  LVSWNAILSGYVNARRIEEANSVFREMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKL 263
           L + NA+++ Y     +E A SVF  MP  + ++W  MI+ LAQ+G G + ++LF QM  
Sbjct: 458 LSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMK 517

Query: 264 EGLEPCDYAFAGAITSC 314
           E + P    F   +T+C
Sbjct: 518 EDILPDRITFLTILTAC 534


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/104 (78%), Positives = 90/104 (86%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMPERNML 182
           NAL T Y KCGK  EAR+VF++MPV+DLVSWNAILSGYVNA RI+EA S F EMPERN+L
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393

Query: 183 TWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           TWTVMISGLAQNG GEE LKLFN+MK EG EPCDYAFAGAI +C
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIAC 437



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   NALITFYTKCGKT---------LEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVF 155
           NAL++ + KC  +           AR++FD M  RD +SW  +++GYV    ++ A    
Sbjct: 189 NALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFL 248

Query: 156 REMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
             M E+ ++ W  MISG   +G   E L++F +M L G++  ++ +   +++C
Sbjct: 249 DGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSAC 301


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/104 (75%), Positives = 89/104 (85%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMPERNML 182
           NAL+T Y KCGK  EA+ VF+ MPVRDLVSWN ILSGY+NA R++EA + F EMPE+N+L
Sbjct: 336 NALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEKNIL 395

Query: 183 TWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           +W VMISGLAQNG GEEGLKLFNQMKL G EPCDYAFAGAITSC
Sbjct: 396 SWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSC 439



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   NALITFYTKCGKTLE---------ARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVF 155
           NALI+ Y KC  +           ARR+FD MPVRD +SW  I++GYV    ++ A  VF
Sbjct: 191 NALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTTIITGYVKNDDLDAAREVF 250

Query: 156 REMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
             M E+ ++ W  MISG    GL +E L++F +M L GL+  ++ +   I++C
Sbjct: 251 DGMREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKLDEFTYTSIISAC 303



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREM------ 164
           NALIT Y +CG    AR +F  MP  D VSWNA+++         +A  +F EM      
Sbjct: 468 NALITMYARCGVVEAARTLFLSMPCVDSVSWNAMIAALGQHGYGVQAIELFEEMLIEGIL 527

Query: 165 PERNMLTWTVMISGLAQNGLGEEGLKLFNQM 257
           P+R  +T+  ++S  +  GL +EG + FN M
Sbjct: 528 PDR--ITFLTVLSACSHAGLVKEGHRYFNSM 556


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  154 bits (390), Expect = 5e-36
 Identities = 72/104 (69%), Positives = 86/104 (82%)
 Frame = +3

Query: 3   NALITFYTKCGKTLEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVFREMPERNML 182
           N LIT Y K GK   AR++F  MPV+D+++WN +LSGYVNA R+EEA S F +MPE+N+L
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL 391

Query: 183 TWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
           TWTVMISGLAQNG GE+ LKLFNQMKL+G EP DYAFAGAIT+C
Sbjct: 392 TWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITAC 435



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   NALITFYTKCGKT---------LEARRVFDRMPVRDLVSWNAILSGYVNARRIEEANSVF 155
           NAL++ Y KC  +           AR++FD MP R+   W  +++GYV    +  A  + 
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246

Query: 156 REMPERNMLTWTVMISGLAQNGLGEEGLKLFNQMKLEGLEPCDYAFAGAITSC 314
             M E+  + W  MISG   +GL E+ L LF +M+L G++  +  +   I++C
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISAC 299