BLASTX nr result

ID: Glycyrrhiza23_contig00024065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024065
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598665.1| Integrator complex subunit [Medicago truncat...   493   e-137
ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   458   e-127
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   376   e-102
ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homo...   374   e-101
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   374   e-101

>ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
           gi|355487713|gb|AES68916.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 536

 Score =  493 bits (1270), Expect = e-137
 Identities = 243/291 (83%), Positives = 265/291 (91%)
 Frame = -1

Query: 873 GTLVIKAFSSGVEIGSCNWILNGPKGDIAYLSNSRFISAHAMTFDYHSLRGTCALIYSDF 694
           GTLVIKAFSSGVEIGS NW LNGPKGDIAYLS+S F SAHAM FDY SL+ T  LIYSDF
Sbjct: 32  GTLVIKAFSSGVEIGSSNWTLNGPKGDIAYLSSSCFFSAHAMAFDYSSLQRTSTLIYSDF 91

Query: 693 SSLSDAQDAEDGDNYSVPTDDKLLPLSFQDLDGSNLNSDEILEEKEKLVFICSCAIECVK 514
           SSL DAQD EDGDNY+ PT DKLLP SF+D DG +L+SD  L+EKEKLVFICSCAIECVK
Sbjct: 92  SSLIDAQDVEDGDNYTDPTSDKLLPPSFEDSDGFSLDSDVNLDEKEKLVFICSCAIECVK 151

Query: 513 DGGSVLIPISRLGTILQLLEEITTSLEVSAMKVPVYIISSVAEELLALLNIIPEWLCKER 334
           DGGSVLIPI+RLGTILQLLEE+ T LE SAM+VP+YIISSVAEELLALLNIIPEWL K+R
Sbjct: 152 DGGSVLIPINRLGTILQLLEEMATLLEASAMEVPIYIISSVAEELLALLNIIPEWLSKQR 211

Query: 333 QKRLFAGEPLFAYVKLLKEKKIHVIPDIHSHQLLKNWLEPCIVFCPHWSLRLGPVVHLLR 154
           Q+RLFAGEPLF +VKLLKEKKI V+P+IHSHQLLK+W EPCIVFCPHWSLR+GP+VHLLR
Sbjct: 212 QERLFAGEPLFDHVKLLKEKKIRVVPNIHSHQLLKDWQEPCIVFCPHWSLRMGPIVHLLR 271

Query: 153 RWCGDPKSLLILEDMLDPELALLPFKPVAMKVLQCLFPSGIGLQKVQPLLK 1
           RWCGDPKSLLILEDM++PELALLPFKPV MKVLQCLFPSGIGLQK+QPLLK
Sbjct: 272 RWCGDPKSLLILEDMVNPELALLPFKPVEMKVLQCLFPSGIGLQKLQPLLK 322


>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
            [Glycine max]
          Length = 794

 Score =  458 bits (1178), Expect = e-127
 Identities = 231/298 (77%), Positives = 255/298 (85%), Gaps = 7/298 (2%)
 Frame = -1

Query: 873  GTLVIKAFSSGVEIGSCNWILNGPKGDIAYLSNSRFISAHAMTFDYHSLRGTCALIYSDF 694
            GTLVIKAFSSG+EIGSCNWILN PKGDIAYLS S FISAHAM FDYHSL+GTC LIYSDF
Sbjct: 316  GTLVIKAFSSGIEIGSCNWILNSPKGDIAYLSGSSFISAHAMPFDYHSLQGTCVLIYSDF 375

Query: 693  SSLSDAQDAEDGDNYSVPTDDKLLPLSFQDLDGSNLNSDEILEEKEKLVFICSCAIECVK 514
             SL D QD E+GDNYSV T DKLLP+S QDL G N NS E  EEKEKLVFICS A+E +K
Sbjct: 376  LSLGDTQDGENGDNYSVSTADKLLPISSQDLAGFNHNSVEYSEEKEKLVFICSHAMEHIK 435

Query: 513  DGGSVLIPISRLGTILQLLEEITTSLEVSAMKVPVYIISSVAEELLALLNIIPEWLCKER 334
             GGSVLIP  RLGTIL LLEE+T SLE S  KVPVYIISSVAEELLALLNIIPEWLCK+R
Sbjct: 436  QGGSVLIPFDRLGTILLLLEEMTASLEASDTKVPVYIISSVAEELLALLNIIPEWLCKQR 495

Query: 333  QKRLFAGEPLFAYVKLLKEKKIHVIPDIHSHQLLK-------NWLEPCIVFCPHWSLRLG 175
            Q++LF GEPLFA++KLLKE+KIHV+P IHSH+LL        NW EPCIVFCPH +LR+G
Sbjct: 496  QEKLFDGEPLFAHLKLLKERKIHVVPAIHSHELLNXCVACRINWQEPCIVFCPHRNLRMG 555

Query: 174  PVVHLLRRWCGDPKSLLILEDMLDPELALLPFKPVAMKVLQCLFPSGIGLQKVQPLLK 1
            PVVHLLRRWCGDPKSLLILED+L+P L+LLP++PVAMKVLQC+FP GIGL +VQPLLK
Sbjct: 556  PVVHLLRRWCGDPKSLLILEDVLNP-LSLLPYQPVAMKVLQCVFPVGIGLHEVQPLLK 612


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
            gi|296081277|emb|CBI17721.3| unnamed protein product
            [Vitis vinifera]
          Length = 774

 Score =  376 bits (965), Expect = e-102
 Identities = 193/295 (65%), Positives = 229/295 (77%), Gaps = 4/295 (1%)
 Frame = -1

Query: 873  GTLVIKAFSSGVEIGSCNWILNGPKGDIAYLSNSRFISAHAMTFDYHSLRGTCALIYSDF 694
            GTL+IKA SSG+EIG+CNW +NGPK +IA LS+S F S+HAM FDYH+LRG   +IYSD 
Sbjct: 300  GTLIIKAVSSGLEIGTCNWTINGPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDL 359

Query: 693  SSLSDAQDAEDGDNYSVPTDDKLLPLSFQDLDGSN----LNSDEILEEKEKLVFICSCAI 526
            SS    +D +D   YS PT  K   LS  +   ++    L++ E LEE EKL FICSC I
Sbjct: 360  SS-PVLEDVKDNSCYSAPTSQKSSTLSADNDQEASAELLLSTSESLEEMEKLNFICSCII 418

Query: 525  ECVKDGGSVLIPISRLGTILQLLEEITTSLEVSAMKVPVYIISSVAEELLALLNIIPEWL 346
            + VK GGSVLIPI RLG ILQLLE I+ SLE S++KVP++IISSVAEELLA  NIIPEWL
Sbjct: 419  DSVKAGGSVLIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWL 478

Query: 345  CKERQKRLFAGEPLFAYVKLLKEKKIHVIPDIHSHQLLKNWLEPCIVFCPHWSLRLGPVV 166
            CK+RQ++LF+GEP FA+ +L+KEKK+HV P +HS  LLK W EPCI F PHWSLRLGPVV
Sbjct: 479  CKQRQEKLFSGEPFFAHTQLIKEKKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVV 538

Query: 165  HLLRRWCGDPKSLLILEDMLDPELALLPFKPVAMKVLQCLFPSGIGLQKVQPLLK 1
            HLLRRW GD  SLLI+E+ +D +LALLPFKP+AMKVLQC F SGI LQKVQPLLK
Sbjct: 539  HLLRRWSGDENSLLIMEEGVDADLALLPFKPMAMKVLQCSFLSGIKLQKVQPLLK 593


>ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
            sativus]
          Length = 680

 Score =  374 bits (959), Expect = e-101
 Identities = 190/292 (65%), Positives = 232/292 (79%), Gaps = 1/292 (0%)
 Frame = -1

Query: 873  GTLVIKAFSSGVEIGSCNWILNGPKGDIAYLSNSRFISAHAMTFDYHSLRGTCALIYSDF 694
            GTLVIKAFSSG+EIGSCNW +N PK DIAY+S+S F S++AM FDY +L+    +IYSDF
Sbjct: 213  GTLVIKAFSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQKE-TIIYSDF 271

Query: 693  SSLSDAQDAEDGDNYSVPTDDKLLPLSFQDLDGSNLNSD-EILEEKEKLVFICSCAIECV 517
            SSL+   D E+    S+  D+ LLPLS ++   + L+   E +EE EKL FICSCAI+ V
Sbjct: 272  SSLAFMNDVENDTRVSL-IDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSV 330

Query: 516  KDGGSVLIPISRLGTILQLLEEITTSLEVSAMKVPVYIISSVAEELLALLNIIPEWLCKE 337
            + GGSVLIPI+RLG  LQLLE+I+ SL+ S +KVP+Y ISSVAEELL   N IPEWLC++
Sbjct: 331  ESGGSVLIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQ 390

Query: 336  RQKRLFAGEPLFAYVKLLKEKKIHVIPDIHSHQLLKNWLEPCIVFCPHWSLRLGPVVHLL 157
            RQ +LF+GEP+F +V+LLKE K+HV+P IHS +LL NW EPCIVFCPHWSLRLGPVVHLL
Sbjct: 391  RQHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLL 450

Query: 156  RRWCGDPKSLLILEDMLDPELALLPFKPVAMKVLQCLFPSGIGLQKVQPLLK 1
            RRWCGDP SLL+LE  LD EL+LLPFKP++MKVLQC F SGI  +KV+PLLK
Sbjct: 451  RRWCGDPSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLK 502


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  374 bits (959), Expect = e-101
 Identities = 190/292 (65%), Positives = 232/292 (79%), Gaps = 1/292 (0%)
 Frame = -1

Query: 873  GTLVIKAFSSGVEIGSCNWILNGPKGDIAYLSNSRFISAHAMTFDYHSLRGTCALIYSDF 694
            GTLVIKAFSSG+EIGSCNW +N PK DIAY+S+S F S++AM FDY +L+    +IYSDF
Sbjct: 226  GTLVIKAFSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQKE-TIIYSDF 284

Query: 693  SSLSDAQDAEDGDNYSVPTDDKLLPLSFQDLDGSNLNSD-EILEEKEKLVFICSCAIECV 517
            SSL+   D E+    S+  D+ LLPLS ++   + L+   E +EE EKL FICSCAI+ V
Sbjct: 285  SSLAFMNDVENDTRVSL-IDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSV 343

Query: 516  KDGGSVLIPISRLGTILQLLEEITTSLEVSAMKVPVYIISSVAEELLALLNIIPEWLCKE 337
            + GGSVLIPI+RLG  LQLLE+I+ SL+ S +KVP+Y ISSVAEELL   N IPEWLC++
Sbjct: 344  ESGGSVLIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQ 403

Query: 336  RQKRLFAGEPLFAYVKLLKEKKIHVIPDIHSHQLLKNWLEPCIVFCPHWSLRLGPVVHLL 157
            RQ +LF+GEP+F +V+LLKE K+HV+P IHS +LL NW EPCIVFCPHWSLRLGPVVHLL
Sbjct: 404  RQHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLL 463

Query: 156  RRWCGDPKSLLILEDMLDPELALLPFKPVAMKVLQCLFPSGIGLQKVQPLLK 1
            RRWCGDP SLL+LE  LD EL+LLPFKP++MKVLQC F SGI  +KV+PLLK
Sbjct: 464  RRWCGDPSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLK 515


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