BLASTX nr result

ID: Glycyrrhiza23_contig00024057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024057
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629365.1| GATA transcription factor [Medicago truncatu...   185   1e-44
ref|NP_001242253.1| uncharacterized protein LOC100783966 [Glycin...   167   3e-39
ref|XP_003519878.1| PREDICTED: GATA transcription factor 5-like ...   145   9e-33
ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti...   144   2e-32
emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]   144   2e-32

>ref|XP_003629365.1| GATA transcription factor [Medicago truncatula]
           gi|355523387|gb|AET03841.1| GATA transcription factor
           [Medicago truncatula]
          Length = 291

 Score =  185 bits (470), Expect = 1e-44
 Identities = 121/238 (50%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
 Frame = -2

Query: 703 MECV--EAALKSSLRKDMALKLTPQTLLEELSAFNVQNITSCEDFSVDDLLDFSHEEGLL 530
           MECV  EAALKSS     A+KLTPQ LLE+LS+FNVQ+I   +DF VDD L+FS+EE   
Sbjct: 1   MECVKAEAALKSSFNISTAVKLTPQNLLEDLSSFNVQDIAPIDDFFVDDFLNFSNEE--- 57

Query: 529 XXXXXXXXXXXXXXXXQNHTPVSVSPQHNNTQNHEACYPLLNDHFGSLLPTTELSVPAED 350
                           QNHT     PQ+     ++  +P+LN+ F S LPTTEL+VP E+
Sbjct: 58  --QEHEHEQDFLVEKQQNHT-----PQYTTQNQNQISHPILNNQFVS-LPTTELTVPVEE 109

Query: 349 AADLEWLSYFVEDSFSEKFPTGTITEN--LAAKAPEPETLFSFSTTPCFKTPVPAKARSK 176
           AADLEWLSYFVEDSFSE FP    TEN  L  KA EP   FS   TPCFKTPVPAKARSK
Sbjct: 110 AADLEWLSYFVEDSFSE-FPK---TENLQLQQKAHEPNPTFS---TPCFKTPVPAKARSK 162

Query: 175 RTRTGVRVWPLRSPSFADXXXXXXXXXXXXXXXXSHFEQCCSETNPPEKKAKKRTSPE 2
           RTRTG+RVWP+   + +                 S+ E+C   + P EKKAK+  SP+
Sbjct: 163 RTRTGIRVWPISLANSSS-------TSSSATLSSSNLEEC---SKPAEKKAKRMVSPD 210


>ref|NP_001242253.1| uncharacterized protein LOC100783966 [Glycine max]
           gi|255637027|gb|ACU18846.1| unknown [Glycine max]
          Length = 352

 Score =  167 bits (423), Expect = 3e-39
 Identities = 109/208 (52%), Positives = 130/208 (62%), Gaps = 3/208 (1%)
 Frame = -2

Query: 736 MFVPF*GLKREMECVEAALKSSLRKDMALKLTPQTLLEELSAFNVQNITSCEDFSVDDLL 557
           +++PF   ++EMECVEAALKS+ RK+M LKL+P+T  EE+S   VQN T+C+DF V+DLL
Sbjct: 34  LYLPFPQAEKEMECVEAALKSNYRKEMTLKLSPRTFTEEVS---VQNGTTCDDFFVNDLL 90

Query: 556 DFSHEEGLLXXXXXXXXXXXXXXXXQNHTPVSVSPQHNNTQNHEACYPLLNDHFGSLLPT 377
           DFSH E                   Q  TP  VS QH N  +HE C     D + S +PT
Sbjct: 91  DFSHVE--------------EEPEQQEDTP-CVSLQHEN-PSHEPC--TFKDDYAS-VPT 131

Query: 376 TELSVPAEDAADLEWLSYFVEDSFSE---KFPTGTITENLAAKAPEPETLFSFSTTPCFK 206
           +ELSV A+D ADLEWLS+FVEDSFSE    FP  T+TEN  A   E E        P FK
Sbjct: 132 SELSVLADDLADLEWLSHFVEDSFSEFSAAFP--TVTENPTACLKEAEPEPEIPVFP-FK 188

Query: 205 TPVPAKARSKRTRTGVRVWPLRSPSFAD 122
           TPV  KARSKRTR G+RVWP  SPSF D
Sbjct: 189 TPVQTKARSKRTRNGLRVWPFGSPSFTD 216


>ref|XP_003519878.1| PREDICTED: GATA transcription factor 5-like [Glycine max]
          Length = 351

 Score =  145 bits (367), Expect = 9e-33
 Identities = 105/203 (51%), Positives = 122/203 (60%), Gaps = 7/203 (3%)
 Frame = -2

Query: 712 KREMECVEAALKSSLRKDMALKLTPQTLLEELS-AFNVQNIT-SCEDFSVDDLLDFSHEE 539
           ++EMEC+EAALKSS RKDMALK T    LEE S A NVQN+  S +D  VDDLL+FS  E
Sbjct: 47  EKEMECLEAALKSSFRKDMALKQT--LFLEEFSSASNVQNVVASSDDLFVDDLLNFSLLE 104

Query: 538 GLLXXXXXXXXXXXXXXXXQNHTPVSVSPQHNNTQNHEACYPLLNDHFGSLLPTTELSVP 359
                               NH   S +PQ NN +N+       N  F      TEL+VP
Sbjct: 105 N---NTNNNNNNEEPDQQLNNHD--STTPQ-NNQENYN-----YNPSFNDNNFNTELTVP 153

Query: 358 AED-AADLEWLSYFVEDS----FSEKFPTGTITENLAAKAPEPETLFSFSTTPCFKTPVP 194
           AE+  ADLEWLS FVEDS    +S  FP  T+TE +  K+PEP      +T   FKTPVP
Sbjct: 154 AEEEVADLEWLSRFVEDSNFSEYSLPFPA-TVTEKVKVKSPEPG-----NTAFTFKTPVP 207

Query: 193 AKARSKRTRTGVRVWPLRSPSFA 125
           AKARSKRTRTGVRVWPL+SPS A
Sbjct: 208 AKARSKRTRTGVRVWPLKSPSLA 230


>ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera]
          Length = 338

 Score =  144 bits (364), Expect = 2e-32
 Identities = 106/257 (41%), Positives = 132/257 (51%), Gaps = 23/257 (8%)
 Frame = -2

Query: 703 MECVEAALKSSL-RKDMALKLTPQ-TLLEELSAFNVQNITSCEDFSVDDLLDFSHE---E 539
           MECVE ALKSS+ R ++A KLT Q   ++++   N Q+  S +DFS+DDLLDF++    E
Sbjct: 1   MECVEKALKSSVVRPELAFKLTQQPACMDDMCMGNGQSGVSGDDFSIDDLLDFTNGGIGE 60

Query: 538 GLLXXXXXXXXXXXXXXXXQNHTPVSVSPQHNNTQNHEACYPL----LNDHFGSLLPTTE 371
           GL                       S+SP+   T+N  +        + D F S+ P TE
Sbjct: 61  GLFQEEDEEDEDKGCG---------SLSPRGELTENDNSNLTTTTFSVKDEFPSV-PATE 110

Query: 370 LSVPAEDAADLEWLSYFVEDSFSE---KFPTGTITE---NLAAKAPEPETLFSFSTTPCF 209
           L+VPA+D ADLEWLS+FVEDSFSE    FP GT+TE   N     PEPET     +  C 
Sbjct: 111 LTVPADDLADLEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEPETPLQIKS--CL 168

Query: 208 KTPVPAKARSKRTRTGVRVWPLRSPSFAD--------XXXXXXXXXXXXXXXXSHFEQCC 53
           KTP PAKARSKR RTG RVW + SPS  +                         + E   
Sbjct: 169 KTPFPAKARSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPWLIYPNTCQNVESFH 228

Query: 52  SETNPPEKKAKKRTSPE 2
           S   PP KK KKR  PE
Sbjct: 229 SAVKPPAKKHKKRLDPE 245


>emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]
          Length = 338

 Score =  144 bits (364), Expect = 2e-32
 Identities = 106/257 (41%), Positives = 131/257 (50%), Gaps = 23/257 (8%)
 Frame = -2

Query: 703 MECVEAALKSSL-RKDMALKLTPQ-TLLEELSAFNVQNITSCEDFSVDDLLDFSHE---E 539
           MECVE ALKSS+ R ++A KLT Q    +++   N Q+  S +DFS+DDLLDF++    E
Sbjct: 1   MECVEKALKSSVVRPELAFKLTQQPACXDDICMGNGQSGVSGDDFSIDDLLDFTNGGIGE 60

Query: 538 GLLXXXXXXXXXXXXXXXXQNHTPVSVSPQHNNTQNHEACYPL----LNDHFGSLLPTTE 371
           GL                       S+SP+   T+N  +        + D F S+ P TE
Sbjct: 61  GLFQEEDEEDEDKGCG---------SLSPRRELTENDNSNLTTTTFSVKDEFPSV-PATE 110

Query: 370 LSVPAEDAADLEWLSYFVEDSFSE---KFPTGTITE---NLAAKAPEPETLFSFSTTPCF 209
           L+VPA+D ADLEWLS+FVEDSFSE    FP GT+TE   N     PEPET     +  C 
Sbjct: 111 LTVPADDLADLEWLSHFVEDSFSEYSAPFPPGTLTEKAQNQTENPPEPETPLQIKS--CL 168

Query: 208 KTPVPAKARSKRTRTGVRVWPLRSPSFAD--------XXXXXXXXXXXXXXXXSHFEQCC 53
           KTP PAKARSKR RTG RVW + SPS  +                         + E   
Sbjct: 169 KTPFPAKARSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPWLIYPNTCQNVESFH 228

Query: 52  SETNPPEKKAKKRTSPE 2
           S   PP KK KKR  PE
Sbjct: 229 SAVKPPAKKHKKRLDPE 245


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