BLASTX nr result

ID: Glycyrrhiza23_contig00024048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024048
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...    77   1e-12
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...    73   3e-11
ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...    68   9e-10
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    66   3e-09

>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/73 (47%), Positives = 47/73 (64%)
 Frame = +3

Query: 252 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXXSVSSHLRRLCTDDSIWRDICTATWPS 431
           +  +SSS I+T+HP+I Q+HI             S +SHLR LCT+  +WR+IC ATWPS
Sbjct: 37  DKTSSSSDITTVHPDIFQSHILNRLDGPTLASAASATSHLRGLCTEHHLWRNICAATWPS 96

Query: 432 LADPIAGDAISTF 470
           L DP+A   I+TF
Sbjct: 97  LNDPLAAATIATF 109


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/73 (46%), Positives = 47/73 (64%)
 Frame = +3

Query: 252 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXXSVSSHLRRLCTDDSIWRDICTATWPS 431
           ++ + SS I+T+HP+I Q+HI             S +SHLRRLCT+  +WR+I  ATWPS
Sbjct: 2   DNTSFSSDITTVHPDIFQSHILNRLDGPTLASAASSTSHLRRLCTEHHLWRNISAATWPS 61

Query: 432 LADPIAGDAISTF 470
           L DP+A   I+TF
Sbjct: 62  LNDPLAAAIITTF 74


>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/71 (46%), Positives = 42/71 (59%)
 Frame = +3

Query: 252 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXXSVSSHLRRLCTDDSIWRDICTATWPS 431
           E   S+S ++T+H +II  HI             SVSS + RLCT D +WR+I TATWPS
Sbjct: 15  EKTESTSSLATLHSDIIHAHILTRLDGATLASAASVSSLMHRLCTQDDLWREISTATWPS 74

Query: 432 LADPIAGDAIS 464
           L +PIA   IS
Sbjct: 75  LQNPIARHVIS 85


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = +3

Query: 276 ISTMHPEIIQTHIXXXXXXXXXXXXXSVSSHLRRLCTDDSIWRDICTATWPSLADPIAGD 455
           IST+HP+I+QTHI               SS L  L T+D +WR+ICT++WPS+ DP    
Sbjct: 22  ISTLHPDILQTHILTLLDGPTLAATACASSELYALSTEDKLWRNICTSSWPSINDPTVSS 81

Query: 456 AISTF 470
            ISTF
Sbjct: 82  IISTF 86


>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/68 (45%), Positives = 40/68 (58%)
 Frame = +3

Query: 267 SSMISTMHPEIIQTHIXXXXXXXXXXXXXSVSSHLRRLCTDDSIWRDICTATWPSLADPI 446
           S+ I+++HP+IIQTHI             + SS L  L T D +WRDICT+TWPSL DP 
Sbjct: 5   STTITSVHPDIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPT 64

Query: 447 AGDAISTF 470
               +S F
Sbjct: 65  LQALVSAF 72


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