BLASTX nr result

ID: Glycyrrhiza23_contig00024043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024043
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546969.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   134   6e-30
ref|XP_003542078.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   133   2e-29
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   129   2e-28
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   127   1e-27
ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_003546969.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 812

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/81 (82%), Positives = 70/81 (86%)
 Frame = -2

Query: 244 LVQPAFQIALGQIRSVTLDKFKEAFDKALDRGEDFSAAANNCIGSYMDQFDEGCADVVIE 65
           LVQP FQI LG +RS  LDKFKEAFDKAL+ GE FS+AAN CI  YM QFDEGCADVVIE
Sbjct: 365 LVQPTFQIVLGHMRSGILDKFKEAFDKALNGGEGFSSAANKCIEIYMAQFDEGCADVVIE 424

Query: 64  IANWDTSKVREKLQRDIDAHV 2
           IANWDTSKVREKLQRDIDAHV
Sbjct: 425 IANWDTSKVREKLQRDIDAHV 445


>ref|XP_003542078.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 800

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/81 (82%), Positives = 70/81 (86%)
 Frame = -2

Query: 244 LVQPAFQIALGQIRSVTLDKFKEAFDKALDRGEDFSAAANNCIGSYMDQFDEGCADVVIE 65
           LVQP FQIALG IRS  LDKFKEAFDKAL+ GE FS+AAN CI  YM QFDEGCADVVIE
Sbjct: 365 LVQPTFQIALGHIRSGILDKFKEAFDKALNGGEGFSSAANKCIEFYMAQFDEGCADVVIE 424

Query: 64  IANWDTSKVREKLQRDIDAHV 2
           IANWDTSK REKLQR+IDAHV
Sbjct: 425 IANWDTSKGREKLQREIDAHV 445


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  129 bits (324), Expect = 2e-28
 Identities = 66/81 (81%), Positives = 66/81 (81%)
 Frame = -2

Query: 244 LVQPAFQIALGQIRSVTLDKFKEAFDKALDRGEDFSAAANNCIGSYMDQFDEGCADVVIE 65
           LVQPAFQ ALG IRS TLDKFKEAFDK L  GE FS AANNCIGS M QFDE C DVVIE
Sbjct: 365 LVQPAFQSALGHIRSGTLDKFKEAFDKTLKGGEGFSVAANNCIGSCMVQFDEACTDVVIE 424

Query: 64  IANWDTSKVREKLQRDIDAHV 2
             NWDTSKVREKL RDIDAHV
Sbjct: 425 QTNWDTSKVREKLLRDIDAHV 445


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/81 (80%), Positives = 67/81 (82%)
 Frame = -2

Query: 244 LVQPAFQIALGQIRSVTLDKFKEAFDKALDRGEDFSAAANNCIGSYMDQFDEGCADVVIE 65
           LVQPAFQ ALG IRS TLDKFKEAFDKAL  GE FS AANNCIGS + QFDE C DVVIE
Sbjct: 365 LVQPAFQSALGHIRSGTLDKFKEAFDKALKGGEGFSVAANNCIGSGLVQFDEACTDVVIE 424

Query: 64  IANWDTSKVREKLQRDIDAHV 2
             NWDTSKVREKL RDIDA+V
Sbjct: 425 QTNWDTSKVREKLLRDIDAYV 445


>ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/81 (74%), Positives = 65/81 (80%)
 Frame = -2

Query: 244 LVQPAFQIALGQIRSVTLDKFKEAFDKALDRGEDFSAAANNCIGSYMDQFDEGCADVVIE 65
           LVQPA Q  LG IRS TL+KFKEAFDKAL+ GE FS AA  C  SYM QFDE CAD VIE
Sbjct: 270 LVQPAHQSMLGHIRSGTLEKFKEAFDKALNAGEGFSLAAQTCTQSYMAQFDEWCADAVIE 329

Query: 64  IANWDTSKVREKLQRDIDAHV 2
            ANWDTSKVR+KL+RDIDAH+
Sbjct: 330 QANWDTSKVRDKLRRDIDAHI 350


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