BLASTX nr result

ID: Glycyrrhiza23_contig00024011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024011
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycin...    86   2e-15
ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago t...    83   3e-14
gb|ABD28519.2| Putative nucleolar protein, related [Medicago tru...    83   3e-14
ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi...    64   1e-08
ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi...    64   1e-08

>ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 643

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/47 (78%), Positives = 45/47 (95%)
 Frame = +2

Query: 5   FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNAN 145
           FR PIEEIA+R+QSML++IGS+E+IWGRGS+FP D+DDAYEWLVNAN
Sbjct: 32  FRRPIEEIARRTQSMLDRIGSAENIWGRGSAFPGDVDDAYEWLVNAN 78


>ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
           gi|355499701|gb|AES80904.1| Exosome complex exonuclease
           rrp6 [Medicago truncatula]
          Length = 832

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 18/108 (16%)
 Frame = +2

Query: 5   FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184
           FRH I+++ ++SQSMLN+IGSS+HIWG  SSFP D+DD YEW+VNAN             
Sbjct: 33  FRHLIDQLTQKSQSMLNQIGSSDHIWGHNSSFPVDVDDGYEWMVNANDDVLELVDEVVDE 92

Query: 185 FQK----------EEGAVNLGNE--------TNKENDKKHKVSFHLAT 274
           F +          E+G   +  E         +  N+ K KVSFH+ T
Sbjct: 93  FHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHT 140


>gb|ABD28519.2| Putative nucleolar protein, related [Medicago truncatula]
          Length = 233

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 18/108 (16%)
 Frame = +2

Query: 5   FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184
           FRH I+++ ++SQSMLN+IGSS+HIWG  SSFP D+DD YEW+VNAN             
Sbjct: 33  FRHLIDQLTQKSQSMLNQIGSSDHIWGHNSSFPVDVDDGYEWMVNANDDVLELVDEVVDE 92

Query: 185 FQK----------EEGAVNLGNE--------TNKENDKKHKVSFHLAT 274
           F +          E+G   +  E         +  N+ K KVSFH+ T
Sbjct: 93  FHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHT 140


>ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 935

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +2

Query: 5   FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184
           F+ PI  I ++SQSML  IGSS  +WG+  +FP D DDAY+WLVN N             
Sbjct: 51  FKIPIRTIERQSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDE 110

Query: 185 FQK 193
           FQK
Sbjct: 111 FQK 113


>ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 936

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +2

Query: 5   FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184
           F+ PI  I ++SQSML  IGSS  +WG+  +FP D DDAY+WLVN N             
Sbjct: 51  FKIPIRTIERQSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDE 110

Query: 185 FQK 193
           FQK
Sbjct: 111 FQK 113


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