BLASTX nr result
ID: Glycyrrhiza23_contig00024011
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00024011 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycin... 86 2e-15 ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago t... 83 3e-14 gb|ABD28519.2| Putative nucleolar protein, related [Medicago tru... 83 3e-14 ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi... 64 1e-08 ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi... 64 1e-08 >ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycine max] Length = 643 Score = 86.3 bits (212), Expect = 2e-15 Identities = 37/47 (78%), Positives = 45/47 (95%) Frame = +2 Query: 5 FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNAN 145 FR PIEEIA+R+QSML++IGS+E+IWGRGS+FP D+DDAYEWLVNAN Sbjct: 32 FRRPIEEIARRTQSMLDRIGSAENIWGRGSAFPGDVDDAYEWLVNAN 78 >ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago truncatula] gi|355499701|gb|AES80904.1| Exosome complex exonuclease rrp6 [Medicago truncatula] Length = 832 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Frame = +2 Query: 5 FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184 FRH I+++ ++SQSMLN+IGSS+HIWG SSFP D+DD YEW+VNAN Sbjct: 33 FRHLIDQLTQKSQSMLNQIGSSDHIWGHNSSFPVDVDDGYEWMVNANDDVLELVDEVVDE 92 Query: 185 FQK----------EEGAVNLGNE--------TNKENDKKHKVSFHLAT 274 F + E+G + E + N+ K KVSFH+ T Sbjct: 93 FHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHT 140 >gb|ABD28519.2| Putative nucleolar protein, related [Medicago truncatula] Length = 233 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Frame = +2 Query: 5 FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184 FRH I+++ ++SQSMLN+IGSS+HIWG SSFP D+DD YEW+VNAN Sbjct: 33 FRHLIDQLTQKSQSMLNQIGSSDHIWGHNSSFPVDVDDGYEWMVNANDDVLELVDEVVDE 92 Query: 185 FQK----------EEGAVNLGNE--------TNKENDKKHKVSFHLAT 274 F + E+G + E + N+ K KVSFH+ T Sbjct: 93 FHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHT 140 >ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus] Length = 935 Score = 64.3 bits (155), Expect = 1e-08 Identities = 30/63 (47%), Positives = 37/63 (58%) Frame = +2 Query: 5 FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184 F+ PI I ++SQSML IGSS +WG+ +FP D DDAY+WLVN N Sbjct: 51 FKIPIRTIERQSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDE 110 Query: 185 FQK 193 FQK Sbjct: 111 FQK 113 >ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus] Length = 936 Score = 64.3 bits (155), Expect = 1e-08 Identities = 30/63 (47%), Positives = 37/63 (58%) Frame = +2 Query: 5 FRHPIEEIAKRSQSMLNKIGSSEHIWGRGSSFPADIDDAYEWLVNANXXXXXXXXXXXXX 184 F+ PI I ++SQSML IGSS +WG+ +FP D DDAY+WLVN N Sbjct: 51 FKIPIRTIERQSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDE 110 Query: 185 FQK 193 FQK Sbjct: 111 FQK 113