BLASTX nr result

ID: Glycyrrhiza23_contig00023950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023950
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]         137   2e-30
ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...   133   3e-29
ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]         119   6e-25
ref|XP_003551241.1| PREDICTED: cyclin-D4-1-like [Glycine max]         100   4e-19
ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223...    99   7e-19

>ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 361

 Score =  137 bits (345), Expect = 2e-30
 Identities = 81/113 (71%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
 Frame = -2

Query: 636 AIAVLRELQAKELDKAMTDFFIVEKERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQS 457
           A++VL+ELQA E+DKA+ D  +VEK RVLKC+ELIRDLSLI   AA+LGS    P+VPQS
Sbjct: 255 AVSVLKELQAIEIDKAIIDLLVVEKVRVLKCVELIRDLSLINV-AASLGS--KVPYVPQS 311

Query: 456 PIGVLDAGCLSSKSSDELTVGSCPNSSHN--SPNITKRNNKSDGPSSNGTSES 304
           PIGVLDAGCLS K SDELTVGSCPNSSHN  +PN TKR +K DGP SNGTS S
Sbjct: 312 PIGVLDAGCLSYK-SDELTVGSCPNSSHNISNPNPTKR-SKPDGP-SNGTSNS 361


>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score =  133 bits (334), Expect = 3e-29
 Identities = 76/111 (68%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = -2

Query: 636 AIAV-LRELQAKELDKAMTDFFIVEKERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQ 460
           A+A+ L+EL  +E+DKA+TDFFIV+KERVLKC+ELIRDLSLIK     +G N  A FVPQ
Sbjct: 245 AVAISLKELPTQEVDKAITDFFIVDKERVLKCVELIRDLSLIK-----VGGNNFASFVPQ 299

Query: 459 SPIGVLDAGCLSSKSSDELTVGSCPNSSHNSPNITKRNNKSDGPSSNGTSE 307
           SPIGVLDAGC+S K SDELT GSCPNSSH+SPN   +  K DGPSS GTS+
Sbjct: 300 SPIGVLDAGCMSFK-SDELTNGSCPNSSHSSPN--AKRMKFDGPSS-GTSQ 346


>ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]
          Length = 351

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/101 (69%), Positives = 83/101 (82%)
 Frame = -2

Query: 636 AIAVLRELQAKELDKAMTDFFIVEKERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQS 457
           AI+V RE+QA+E+DK +T FFIV KER+LKCLELI+DLSLI+  +ANLG+N  A FVPQS
Sbjct: 255 AISVSREMQAEEIDKTLTCFFIVGKERILKCLELIKDLSLIQD-SANLGTN-LASFVPQS 312

Query: 456 PIGVLDAGCLSSKSSDELTVGSCPNSSHNSPNITKRNNKSD 334
           PIGVLDA CLSS  SDELTVGS  +SS N+PN +KR  KSD
Sbjct: 313 PIGVLDAACLSS-ISDELTVGSYTDSSLNTPN-SKRRRKSD 351


>ref|XP_003551241.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 358

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 66/110 (60%), Positives = 81/110 (73%), Gaps = 9/110 (8%)
 Frame = -2

Query: 636 AIAVLRELQAKELDKAM---------TDFFIVEKERVLKCLELIRDLSLIKACAANLGSN 484
           AI+V RE+QA+E+DKA+           FFIV KER+LK LELI+DLSL++  +ANLG+N
Sbjct: 254 AISVSREIQAEEIDKALQMQAEETAAACFFIVGKERILKGLELIKDLSLMQD-SANLGNN 312

Query: 483 KSAPFVPQSPIGVLDAGCLSSKSSDELTVGSCPNSSHNSPNITKRNNKSD 334
             A FVPQSPIGVLDA CLSS  SDELTVGS  +SS ++PN  +R  KSD
Sbjct: 313 L-ASFVPQSPIGVLDAACLSS-ISDELTVGSYRDSSLDTPNSKRR--KSD 358


>ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1|
           cyclin d, putative [Ricinus communis]
          Length = 366

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 5/109 (4%)
 Frame = -2

Query: 636 AIAVLRELQAKELDKAMTDFFIVEKERVLKCLELIRDLSLIKACAANLG----SNKSAPF 469
           AI VL E+QA ++ KAM  F  VE+ERVLKC+ELI+DLSLI   A        +N SA  
Sbjct: 253 AIFVLGEVQAVDVYKAMPCFTHVEEERVLKCVELIKDLSLISGSATTSSGDNVANASASS 312

Query: 468 VPQSPIGVLDAGCLSSKSSDELTVGSCPNSSH-NSPNITKRNNKSDGPS 325
           VPQSP GVL+A CLS K SD+ TVGSC NSSH N+P+  +R   ++ PS
Sbjct: 313 VPQSPNGVLEAACLSYK-SDDTTVGSCANSSHTNTPDTKRRKQTNNNPS 360


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