BLASTX nr result

ID: Glycyrrhiza23_contig00023911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023911
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medic...   214   4e-54
ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medic...   197   7e-49
ref|XP_003548811.1| PREDICTED: dehydrodolichyl diphosphate synth...   188   4e-46
ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synth...   161   4e-38
ref|NP_001240235.1| uncharacterized protein LOC100812145 [Glycin...   130   8e-29

>ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355523148|gb|AET03602.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 360

 Score =  214 bits (546), Expect = 4e-54
 Identities = 105/128 (82%), Positives = 111/128 (86%)
 Frame = +3

Query: 9   HFQDPCKENTTKACGSSLPEGVEGAGEKDDLFEQNVGKHSGNCSEAEITCCNGLIENTEE 188
           HF DPCKEN TKAC S+L E  EGAGEKD LFEQN+ K S NCSE EIT CNG++E TEE
Sbjct: 213 HFHDPCKENGTKAC-SNLHEEGEGAGEKDALFEQNIEKSSDNCSEGEITSCNGIVEITEE 271

Query: 189 RKYKQGELPSIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACLLYAPKALW 368
           +KYKQGE+ SIKLVDIEKHMYM VAPDPDILIRTSGEARLSNFLLWQTSAC LYAPK LW
Sbjct: 272 QKYKQGEIASIKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLW 331

Query: 369 PEIGLRHL 392
           PEIGLRHL
Sbjct: 332 PEIGLRHL 339


>ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355480990|gb|AES62193.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 426

 Score =  197 bits (501), Expect = 7e-49
 Identities = 99/130 (76%), Positives = 106/130 (81%)
 Frame = +3

Query: 3   EMHFQDPCKENTTKACGSSLPEGVEGAGEKDDLFEQNVGKHSGNCSEAEITCCNGLIENT 182
           +++F + C EN TKAC S L E  EGA EKD L EQNV KH  N SE EIT CNG +E T
Sbjct: 277 DLNFHNSCNENETKAC-SILHEEAEGAEEKDALLEQNVKKHDDNYSEGEITSCNGTVEIT 335

Query: 183 EERKYKQGELPSIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACLLYAPKA 362
           EERKYKQ ++ SIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSAC LYAPK 
Sbjct: 336 EERKYKQHQIASIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKV 395

Query: 363 LWPEIGLRHL 392
           LWPEIGLRHL
Sbjct: 396 LWPEIGLRHL 405


>ref|XP_003548811.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
           max]
          Length = 360

 Score =  188 bits (477), Expect = 4e-46
 Identities = 98/132 (74%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
 Frame = +3

Query: 3   EMHFQDPCKE--NTTKACGSSLPEGVEGAGEKDDLFEQNVGKHSGNCSEAEITCCNGLIE 176
           ++ FQD CK+  N TKAC +S+P+ VE AGEKD + E  V K  GN SEAEIT CN L+E
Sbjct: 211 DLLFQDLCKDYQNATKAC-NSVPKRVEPAGEKDGMLEHTVEK--GNDSEAEITSCNELVE 267

Query: 177 NTEERKYKQGELPSIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACLLYAP 356
            TEERKY QG++P IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTS C LYAP
Sbjct: 268 MTEERKYNQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSTCPLYAP 327

Query: 357 KALWPEIGLRHL 392
            ALWPEIGLRHL
Sbjct: 328 TALWPEIGLRHL 339


>ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
           max]
          Length = 308

 Score =  161 bits (408), Expect = 4e-38
 Identities = 79/91 (86%), Positives = 81/91 (89%)
 Frame = +3

Query: 120 KHSGNCSEAEITCCNGLIENTEERKYKQGELPSIKLVDIEKHMYMAVAPDPDILIRTSGE 299
           KHS N SEAEIT CN L E TEERKYKQG++P IKLVDIEKHMYMAVAPDPDILIRTSGE
Sbjct: 197 KHSENNSEAEITLCNELFEMTEERKYKQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGE 256

Query: 300 ARLSNFLLWQTSACLLYAPKALWPEIGLRHL 392
           ARLSNFLLWQTS C LYAP ALWPEIGLRHL
Sbjct: 257 ARLSNFLLWQTSTCPLYAPTALWPEIGLRHL 287


>ref|NP_001240235.1| uncharacterized protein LOC100812145 [Glycine max]
           gi|255641051|gb|ACU20805.1| unknown [Glycine max]
          Length = 149

 Score =  130 bits (328), Expect = 8e-29
 Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
 Frame = +3

Query: 3   EMHFQDPCKE--NTTKACGSSLPEGVEGAGEKDDLFEQNVGKHSGNCSEAEITCCNGLIE 176
           ++ FQD CK+  N TKAC SS+P  VEGAGEKD + E  V KHSGN SEAEIT CN ++E
Sbjct: 44  DLLFQDSCKDYLNATKAC-SSVPNRVEGAGEKDGMLEHTVEKHSGNNSEAEITSCNEMVE 102

Query: 177 NTEERKYKQGELPSIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNF 317
            TEE     GE+P +KLVDIEK+MYMAVAPDPDILIRTSGEA+   F
Sbjct: 103 MTEE-----GEVPFVKLVDIEKNMYMAVAPDPDILIRTSGEAQTQQF 144


Top