BLASTX nr result

ID: Glycyrrhiza23_contig00023899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023899
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589602.1| Filament-like plant protein [Medicago trunca...   291   1e-76
ref|XP_003543808.1| PREDICTED: filament-like plant protein-like ...   266   5e-69
ref|XP_003545637.1| PREDICTED: filament-like plant protein-like ...   254   1e-65
ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase,...   110   3e-22
ref|XP_003634406.1| PREDICTED: filament-like plant protein-like ...   100   5e-19

>ref|XP_003589602.1| Filament-like plant protein [Medicago truncatula]
           gi|355478650|gb|AES59853.1| Filament-like plant protein
           [Medicago truncatula]
          Length = 606

 Score =  291 bits (745), Expect = 1e-76
 Identities = 168/256 (65%), Positives = 186/256 (72%)
 Frame = -2

Query: 769 VVANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXX 590
           VVA++C DKES+LRAEF+IM QQMDELK KLEKV+ADKAELEIALMKSEE IEES     
Sbjct: 239 VVADKCVDKESTLRAEFDIMTQQMDELKGKLEKVQADKAELEIALMKSEECIEESHLQLK 298

Query: 589 XXXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAM 410
                        ENAYKSKQ IENRLMSM+A++ TLS+           ER        
Sbjct: 299 EAVQKLEELQIELENAYKSKQTIENRLMSMEADSHTLSSKVNLLEAEVDKER-------- 350

Query: 409 KCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVAK 230
                 EEL SKSA L LLEA+VDKE+ MSHEIAIKC+ LE+ELE K  K+ LLE+E+ K
Sbjct: 351 ------EELESKSAMLGLLEADVDKEKNMSHEIAIKCEGLEEELESKCAKLELLESEIVK 404

Query: 229 ERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILRSTAS 50
           ERA SDEI  KCKDL EE E K AKVD LE EV+KERAMSEEIA+KCRELEEEILR TAS
Sbjct: 405 ERAASDEIAAKCKDLVEEFERKCAKVDFLEAEVEKERAMSEEIAVKCRELEEEILRPTAS 464

Query: 49  SYGEKKIKQEDLALAA 2
            YGEKKIKQEDLALAA
Sbjct: 465 LYGEKKIKQEDLALAA 480


>ref|XP_003543808.1| PREDICTED: filament-like plant protein-like [Glycine max]
          Length = 911

 Score =  266 bits (679), Expect = 5e-69
 Identities = 150/254 (59%), Positives = 188/254 (74%), Gaps = 1/254 (0%)
 Frame = -2

Query: 772  SVVANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXX 593
            SVV N+C +KESSLR EFEIM QQMDELKEKLEKVEADKAELEIALMKSE  IEES    
Sbjct: 350  SVVTNQCMNKESSLRVEFEIMNQQMDELKEKLEKVEADKAELEIALMKSEGCIEESQLQL 409

Query: 592  XXXXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIA 413
                          ENAYKSKQ++EN L+ M AEA+TLS            ERAVS EIA
Sbjct: 410  REAQEKLEELQREVENAYKSKQRVENHLLDMVAEAETLSVKVEFLEAEVDKERAVSCEIA 469

Query: 412  MKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVA 233
            MK ++LEEEL  KSAK+D+LEAE+DK++ +S EIA+KC+DLE+ELE KS KV +LE+E+ 
Sbjct: 470  MKYRNLEEELERKSAKVDILEAELDKKKDLSSEIAMKCRDLEEELERKSAKVDILESELD 529

Query: 232  KERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILRSTA 53
            K++ +S EI  KC+DLEEELE KSAKVD+LE E+DK++ +S EIAMK ++LEEE+ R +A
Sbjct: 530  KKKDLSSEIAIKCRDLEEELERKSAKVDILEAELDKKKDLSSEIAMKYKDLEEELERKSA 589

Query: 52   S-SYGEKKIKQEDL 14
              S  E ++ ++D+
Sbjct: 590  KVSILEAELDKKDM 603



 Score =  189 bits (480), Expect = 6e-46
 Identities = 124/264 (46%), Positives = 158/264 (59%), Gaps = 7/264 (2%)
 Frame = -2

Query: 772  SVVANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXX 593
            S +A +C D E     E E    ++D L+ +L+K +   +E+ +     EE +E      
Sbjct: 536  SEIAIKCRDLEE----ELERKSAKVDILEAELDKKKDLSSEIAMKYKDLEEELERKSAKV 591

Query: 592  XXXXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIA 413
                            A K K  +E  L S   +   L A            R VS +IA
Sbjct: 592  SILEAELDKKDMPNAIAMKCKD-LEEELESKSTKVDLLEAKVAKE-------RVVSEKIA 643

Query: 412  MKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVA 233
             K  DLEEEL SK AK++LLEA+V KER +S +IA  CKDLE+EL+ KS KV LLE EVA
Sbjct: 644  KKYMDLEEELESKFAKVELLEAQVAKERDVSDKIAKMCKDLEEELQRKSAKVELLEAEVA 703

Query: 232  KERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILR--- 62
            KER + D+I +KCKDLEE LESKSAKV+LL+ EVD ERA+S+EI+MKC++LEE++ R   
Sbjct: 704  KERDVLDKIAKKCKDLEEVLESKSAKVELLDAEVDNERAVSDEISMKCKDLEEKLERKSA 763

Query: 61   ----STASSYGEKKIKQEDLALAA 2
                ST SSYGEKKIKQEDLALAA
Sbjct: 764  KVDLSTTSSYGEKKIKQEDLALAA 787


>ref|XP_003545637.1| PREDICTED: filament-like plant protein-like [Glycine max]
          Length = 957

 Score =  254 bits (649), Expect = 1e-65
 Identities = 143/239 (59%), Positives = 173/239 (72%)
 Frame = -2

Query: 769  VVANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXX 590
            V  N+C +KE SLR EFEIM QQMDELKEKLEKVEADKAELEIALM SEE IEES     
Sbjct: 370  VAINQCINKEISLRVEFEIMNQQMDELKEKLEKVEADKAELEIALMNSEECIEESQHQLR 429

Query: 589  XXXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAM 410
                         ENAYKSKQ++EN L+ M AEA+TLS            ERAVS EIAM
Sbjct: 430  ETQEKLEELQRELENAYKSKQRVENHLLDMVAEAETLSVKVEFLEAEVDKERAVSSEIAM 489

Query: 409  KCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVAK 230
            K +DLEEE   KSAK+D+LE E+DK + +S EIA+KC+DLE+ELE KS KV +LE EVAK
Sbjct: 490  KYRDLEEEFERKSAKVDILEVELDK-KDLSSEIAMKCRDLEEELERKSAKVDILEAEVAK 548

Query: 229  ERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILRSTA 53
            E+ +S EI  KC DLEEELE KSA+VD+LE E+DK++ +S EIA+K R+LE+++ R +A
Sbjct: 549  EKDLSSEIVMKCMDLEEELERKSAEVDILEAELDKKKDLSSEIALKFRDLEKDLERKSA 607



 Score =  209 bits (532), Expect = 5e-52
 Identities = 132/252 (52%), Positives = 161/252 (63%), Gaps = 3/252 (1%)
 Frame = -2

Query: 748  DKESSLRAEFEIMIQQMD-ELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXXXXXXX 572
            DK+  L +E  +  + ++ +L+ K  KV   +AEL+   M +E  ++             
Sbjct: 582  DKKKDLSSEIALKFRDLEKDLERKSAKVNILEAELDKKDMPNEIAMKCKDLKEELESKST 641

Query: 571  XXXXXXXENAYKS--KQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMKCKD 398
                   E A +     KI  +   ++ E Q  SA           ER VS + A KCKD
Sbjct: 642  KVDLLEAEVAKERDVSDKIAKKCKDLEEELQRKSAKVELLEAEVAKERDVSDKYAKKCKD 701

Query: 397  LEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVAKERAM 218
            LEEEL  KSAK++LLEAEV KER +  +IA KCKDLE+ LE KS KV LL+ EV  ERA+
Sbjct: 702  LEEELQRKSAKVELLEAEVAKERDVLDKIAKKCKDLEEVLESKSAKVELLDAEVDNERAV 761

Query: 217  SDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILRSTASSYGE 38
            SDEI+ KCKDLEE+LE KSAKVDLLE E+ KERA SEEIAMKCRELEEE+LRSTASSYGE
Sbjct: 762  SDEISMKCKDLEEKLERKSAKVDLLEEELHKERANSEEIAMKCRELEEELLRSTASSYGE 821

Query: 37   KKIKQEDLALAA 2
            KKIKQEDLALAA
Sbjct: 822  KKIKQEDLALAA 833


>ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
            communis] gi|223546845|gb|EEF48342.1| DNA double-strand
            break repair rad50 ATPase, putative [Ricinus communis]
          Length = 711

 Score =  110 bits (275), Expect = 3e-22
 Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
 Frame = -2

Query: 766  VANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXX 587
            VA   TD ESSLRAE EIMI +  EL+EKL+K+E +K +LE  L K E            
Sbjct: 356  VAKPSTDSESSLRAELEIMINRTAELEEKLQKMEGEKLKLEAKLQKME------------ 403

Query: 586  XXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMK 407
                         +   + QK+E   + ++A  Q + A                 E    
Sbjct: 404  ---------GEKLDLEANLQKMEEENLELEANLQKMEAEYLELETNLQKMEGEKFE---- 450

Query: 406  CKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLETEVAKE 227
               LEE+L +   +   LE  +   +  S E  I+ ++ E  LE        L+ E++K 
Sbjct: 451  ---LEEKLENIQVERTELEMTLTISQEKSEEFLIQLREAELRLEK-------LQKELSKA 500

Query: 226  RAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEI------- 68
                 +I  +   +E E  + ++KV+LLE EV+KER +S E  +KC+ LEEE+       
Sbjct: 501  NESKQQIESQLVHMEVEARTMASKVNLLEAEVEKERVLSAETGVKCKALEEELSEKKLEI 560

Query: 67   -LRSTASSYGEKKIKQEDLALAA 2
             L+ +ASS  E KIKQEDL +AA
Sbjct: 561  DLQKSASSNSEPKIKQEDLDVAA 583


>ref|XP_003634406.1| PREDICTED: filament-like plant protein-like [Vitis vinifera]
          Length = 624

 Score =  100 bits (248), Expect = 5e-19
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 5/180 (2%)
 Frame = -2

Query: 766 VANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXX 587
           V N+ ++++SSLRAE E M  +M EL+EKLEK+EA+KAELEIAL  S++ IE S      
Sbjct: 340 VTNQTSNEDSSLRAELETMTHRMAELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLRE 399

Query: 586 XXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMK 407
                       + A +SKQ +E++L++M+AEA+T+SA           E A+S EI +K
Sbjct: 400 AEMKLEEMQKELDFANESKQALESQLIAMEAEARTMSARVDSLEAEIKKEHAMSAEIGVK 459

Query: 406 CKDLEEELGSKSAKLDLLEA--EVDKERTMSHEIAI---KCKDLEKELEGKSEKVGLLET 242
           C++LE+EL  K  +L   +A     + +    E+AI   K  + +K +    +++  L T
Sbjct: 460 CQELEDELLKKKQELKFQQAASSNSERKVKQEELAIAAGKLAECQKTIASLGKQLKSLAT 519



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
 Frame = -2

Query: 421 EIAMKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIAIKCKDLEKELEGKSEKVGLLET 242
           E+  K + +E E       L + +  ++  +    E  +K ++++KEL+  +E    LE+
Sbjct: 364 ELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALES 423

Query: 241 EVAKERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILR 62
           ++                +E E  + SA+VD LE E+ KE AMS EI +KC+ELE+E+L+
Sbjct: 424 QLIA--------------MEAEARTMSARVDSLEAEIKKEHAMSAEIGVKCQELEDELLK 469

Query: 61  --------STASSYGEKKIKQEDLALAA 2
                     ASS  E+K+KQE+LA+AA
Sbjct: 470 KKQELKFQQAASSNSERKVKQEELAIAA 497


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