BLASTX nr result

ID: Glycyrrhiza23_contig00023896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023896
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...   171   4e-41
ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795...   167   6e-40
ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811...   163   2e-38
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795...   160   8e-38
ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810...   155   3e-36

>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1523

 Score =  171 bits (434), Expect = 4e-41
 Identities = 88/104 (84%), Positives = 91/104 (87%)
 Frame = -2

Query: 313  SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQETSPDAQGKASVS 134
            SQSTMAMSSL PS SMEP  EWT  NNR+TK NRSVSEPDFGR+PRQETS DAQGKA  S
Sbjct: 1113 SQSTMAMSSLVPSGSMEPNGEWTADNNRMTKSNRSVSEPDFGRSPRQETSHDAQGKA--S 1170

Query: 133  GATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2
              TS FSRFSFGSQLLQKTMGLVLKPRPG+QAKLGEKNKFYYDE
Sbjct: 1171 EGTSRFSRFSFGSQLLQKTMGLVLKPRPGKQAKLGEKNKFYYDE 1214


>ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795588 [Glycine max]
          Length = 1404

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/105 (82%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313  SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137
            SQSTM   SL PSASMEP +EWT  NNR+ KPNRSVSEPDFGRTPRQET SPDAQGKA  
Sbjct: 1056 SQSTM---SLAPSASMEPISEWTADNNRMAKPNRSVSEPDFGRTPRQETMSPDAQGKAQA 1112

Query: 136  SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2
            SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE
Sbjct: 1113 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1157


>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
          Length = 1423

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/105 (80%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313  SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137
            SQSTM   SL PSASMEP +EWT  NNR+ KPNRSVSEPD GR PRQET SPDAQGKA  
Sbjct: 1063 SQSTM---SLAPSASMEPISEWTADNNRMAKPNRSVSEPDIGRIPRQETTSPDAQGKAQA 1119

Query: 136  SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2
            SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE
Sbjct: 1120 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1164


>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
          Length = 1424

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/105 (78%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313  SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137
            SQSTM   SL PSASMEP ++WT  NN++ KPNRS+SEPD GRTPRQET SPD QGKA  
Sbjct: 1064 SQSTM---SLAPSASMEPISDWTADNNKMAKPNRSISEPDIGRTPRQETTSPDIQGKAQA 1120

Query: 136  SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2
            SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE
Sbjct: 1121 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1165


>ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810562 [Glycine max]
          Length = 1420

 Score =  155 bits (392), Expect = 3e-36
 Identities = 83/113 (73%), Positives = 87/113 (76%), Gaps = 9/113 (7%)
 Frame = -2

Query: 313  SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQ---------ETSP 161
            SQSTM   SL PSASMEP +EWT  NNR+ KPNRSVSEPDFGRTPRQ          TSP
Sbjct: 1061 SQSTM---SLAPSASMEPISEWTADNNRMGKPNRSVSEPDFGRTPRQVFLVDVSQETTSP 1117

Query: 160  DAQGKASVSGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2
            DAQ K   SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLG+KNKFYYDE
Sbjct: 1118 DAQEKPQASGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGDKNKFYYDE 1170


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