BLASTX nr result
ID: Glycyrrhiza23_contig00023896
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00023896 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me... 171 4e-41 ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795... 167 6e-40 ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811... 163 2e-38 ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795... 160 8e-38 ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810... 155 3e-36 >ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] Length = 1523 Score = 171 bits (434), Expect = 4e-41 Identities = 88/104 (84%), Positives = 91/104 (87%) Frame = -2 Query: 313 SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQETSPDAQGKASVS 134 SQSTMAMSSL PS SMEP EWT NNR+TK NRSVSEPDFGR+PRQETS DAQGKA S Sbjct: 1113 SQSTMAMSSLVPSGSMEPNGEWTADNNRMTKSNRSVSEPDFGRSPRQETSHDAQGKA--S 1170 Query: 133 GATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2 TS FSRFSFGSQLLQKTMGLVLKPRPG+QAKLGEKNKFYYDE Sbjct: 1171 EGTSRFSRFSFGSQLLQKTMGLVLKPRPGKQAKLGEKNKFYYDE 1214 >ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795588 [Glycine max] Length = 1404 Score = 167 bits (424), Expect = 6e-40 Identities = 87/105 (82%), Positives = 90/105 (85%), Gaps = 1/105 (0%) Frame = -2 Query: 313 SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137 SQSTM SL PSASMEP +EWT NNR+ KPNRSVSEPDFGRTPRQET SPDAQGKA Sbjct: 1056 SQSTM---SLAPSASMEPISEWTADNNRMAKPNRSVSEPDFGRTPRQETMSPDAQGKAQA 1112 Query: 136 SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2 SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE Sbjct: 1113 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1157 >ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max] Length = 1423 Score = 163 bits (412), Expect = 2e-38 Identities = 85/105 (80%), Positives = 88/105 (83%), Gaps = 1/105 (0%) Frame = -2 Query: 313 SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137 SQSTM SL PSASMEP +EWT NNR+ KPNRSVSEPD GR PRQET SPDAQGKA Sbjct: 1063 SQSTM---SLAPSASMEPISEWTADNNRMAKPNRSVSEPDIGRIPRQETTSPDAQGKAQA 1119 Query: 136 SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2 SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE Sbjct: 1120 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1164 >ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max] Length = 1424 Score = 160 bits (406), Expect = 8e-38 Identities = 82/105 (78%), Positives = 88/105 (83%), Gaps = 1/105 (0%) Frame = -2 Query: 313 SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQET-SPDAQGKASV 137 SQSTM SL PSASMEP ++WT NN++ KPNRS+SEPD GRTPRQET SPD QGKA Sbjct: 1064 SQSTM---SLAPSASMEPISDWTADNNKMAKPNRSISEPDIGRTPRQETTSPDIQGKAQA 1120 Query: 136 SGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2 SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLGEKNKFYYDE Sbjct: 1121 SGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGEKNKFYYDE 1165 >ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810562 [Glycine max] Length = 1420 Score = 155 bits (392), Expect = 3e-36 Identities = 83/113 (73%), Positives = 87/113 (76%), Gaps = 9/113 (7%) Frame = -2 Query: 313 SQSTMAMSSLDPSASMEPTNEWTTGNNRITKPNRSVSEPDFGRTPRQ---------ETSP 161 SQSTM SL PSASMEP +EWT NNR+ KPNRSVSEPDFGRTPRQ TSP Sbjct: 1061 SQSTM---SLAPSASMEPISEWTADNNRMGKPNRSVSEPDFGRTPRQVFLVDVSQETTSP 1117 Query: 160 DAQGKASVSGATSGFSRFSFGSQLLQKTMGLVLKPRPGRQAKLGEKNKFYYDE 2 DAQ K SG TS FSRF FGSQLLQKT+GLVLKPR GRQAKLG+KNKFYYDE Sbjct: 1118 DAQEKPQASGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGDKNKFYYDE 1170