BLASTX nr result

ID: Glycyrrhiza23_contig00023888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023888
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago ...   100   1e-19
ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arab...    55   6e-06
ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago truncatula]
           gi|124361120|gb|ABN09092.1| hypothetical protein
           MtrDRAFT_AC173289g24v1 [Medicago truncatula]
           gi|355483747|gb|AES64950.1| hypothetical protein
           MTR_2g033600 [Medicago truncatula]
          Length = 85

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/62 (69%), Positives = 48/62 (77%)
 Frame = -1

Query: 412 RWWWVTSNLRWPELDLSLPWWVFRWPALDLSYWSGGWNLQETLLQWNFWLVDDVLWTFVT 233
           RW    S  RWPELDLS PW VFRWPAL+LSYW+ G + QETLL+WNFWLVDDVLW  V 
Sbjct: 4   RWLRGMSIFRWPELDLSFPWSVFRWPALNLSYWNVGRSFQETLLRWNFWLVDDVLWELVR 63

Query: 232 CL 227
           C+
Sbjct: 64  CI 65


>ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arabidopsis lyrata subsp.
           lyrata] gi|297336354|gb|EFH66771.1| hypothetical protein
           ARALYDRAFT_889749 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = -1

Query: 385 RWPELDLSL---PWWVFRWPALDLSYWSGGWNLQETLLQWNFWLVDDVLWTFVT 233
           RW  +DL       W FRWP ++LSY S GWN++   L  N  ++DD+LW+FV+
Sbjct: 5   RWTLMDLPSYLSSSWAFRWPEVNLSYLSSGWNMRLLSLSGNLSIIDDLLWSFVS 58


>ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -1

Query: 403 WVTSNLRWPELDLSLPWW-VFRWPALDLSYWSGGWNLQETLLQWNFWLVDDVLWTFVTCL 227
           W  S  RWPE   S+P   + RWP  D SY++    L+   L+W  + +DDVLWTFVT L
Sbjct: 5   WYPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLES--LRWLDFAIDDVLWTFVTAL 62


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