BLASTX nr result

ID: Glycyrrhiza23_contig00023850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023850
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatu...   244   2e-62
ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycin...   244   2e-62
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   237   2e-60
gb|AFK48588.1| unknown [Lotus japonicus]                              236   3e-60
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...   233   5e-59

>ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatula]
           gi|355518385|gb|AET00009.1| 50S ribosomal protein L20
           [Medicago truncatula] gi|388499506|gb|AFK37819.1|
           unknown [Medicago truncatula]
          Length = 121

 Score =  244 bits (622), Expect = 2e-62
 Identities = 118/121 (97%), Positives = 121/121 (100%)
 Frame = -3

Query: 587 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 408
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTR+
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRI 60

Query: 407 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKVA 228
           HGVNYGNFMHGL+KENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKV+
Sbjct: 61  HGVNYGNFMHGLLKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKVS 120

Query: 227 F 225
           F
Sbjct: 121 F 121


>ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycine max]
           gi|255632234|gb|ACU16475.1| unknown [Glycine max]
          Length = 121

 Score =  244 bits (622), Expect = 2e-62
 Identities = 118/121 (97%), Positives = 120/121 (99%)
 Frame = -3

Query: 587 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 408
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRN KRDMRSLWIQRINAGTR+
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNNKRDMRSLWIQRINAGTRI 60

Query: 407 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKVA 228
           HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVV+PPRKVA
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVIPPRKVA 120

Query: 227 F 225
           F
Sbjct: 121 F 121


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  237 bits (605), Expect = 2e-60
 Identities = 115/120 (95%), Positives = 118/120 (98%)
 Frame = -3

Query: 587 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 408
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 60

Query: 407 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKVA 228
           HGVNYGNFMHGLMKEN+QLNRKVLSEISMHEPYSFK+LVDISRNAFPGNKNVV PP+K A
Sbjct: 61  HGVNYGNFMHGLMKENVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFPPKKDA 120


>gb|AFK48588.1| unknown [Lotus japonicus]
          Length = 121

 Score =  236 bits (603), Expect = 3e-60
 Identities = 112/120 (93%), Positives = 118/120 (98%)
 Frame = -3

Query: 587 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 408
           MNKDKIFKLAKGFRGRAKNCIR+ARERVEKALQYSYRDRRNKKRDMR LWIQRINAGTRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRVARERVEKALQYSYRDRRNKKRDMRGLWIQRINAGTRL 60

Query: 407 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKVA 228
           HGVNYGNFMHGL+KENIQLNRKVLSE+SMHEPY+FKSLVDISRN+FPGNKNVV+PPRK A
Sbjct: 61  HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYTFKSLVDISRNSFPGNKNVVIPPRKAA 120


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  233 bits (593), Expect = 5e-59
 Identities = 114/119 (95%), Positives = 116/119 (97%)
 Frame = -3

Query: 587 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 408
           MNK +IFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTR 
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 407 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRKV 231
           HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFK+LVDISRNAFPGNKNVV PPRKV
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHPPRKV 119


Top