BLASTX nr result

ID: Glycyrrhiza23_contig00023830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023830
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524228.1| PREDICTED: uncharacterized protein LOC100776...   115   5e-24
ref|XP_003629913.1| ATP synthase subunit-like protein [Medicago ...    75   1e-11

>ref|XP_003524228.1| PREDICTED: uncharacterized protein LOC100776555 [Glycine max]
          Length = 585

 Score =  115 bits (289), Expect = 5e-24
 Identities = 65/118 (55%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
 Frame = -2

Query: 543 QKNVKESADDEVFILDN-PSNVFLEVDPGFIEEQETDAYMXXXXXXXXXXRSRAQNCQES 367
           QK VKESAD E  I  N P NV L+ DP FIEEQE    M           S+A+NCQES
Sbjct: 70  QKEVKESADGEFVIPPNIPLNV-LKSDPDFIEEQEEGTIMPKKKGQGQPKGSQAKNCQES 128

Query: 366 VHRNLSSHINPSNMVEVSPECEESEDAVMPKEKGQGQPRGSMMQNCQENAGDEDIYEN 193
            H NL+S  NPSNMVEV+P CEE ED V+P + GQ QPRG   Q C+ENA  E+ Y N
Sbjct: 129 AHGNLNSCTNPSNMVEVAPGCEEPEDEVVPNKNGQEQPRGLRRQYCEENADCENFYSN 186


>ref|XP_003629913.1| ATP synthase subunit-like protein [Medicago truncatula]
           gi|355523935|gb|AET04389.1| ATP synthase subunit-like
           protein [Medicago truncatula]
          Length = 881

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
 Frame = -2

Query: 627 LDNPSNVLLEVDHGFIEEQETGTYGLSR----------QKNVKESADDEVFILDNPSNVF 478
           LDN SN L EVD   +EEQETGT               QK VK+SAD +  +LDN SN  
Sbjct: 81  LDNTSNEL-EVDPELVEEQETGTMPKRNLRDQPKVSTLQKKVKQSADVKTAVLDNQSNE- 138

Query: 477 LEVDPGFIEEQETDAYMXXXXXXXXXXRSRAQNCQESVHRNLSSHINPSNMVEVSPE-CE 301
           LEVDP F+EEQET               +  +  ++S +   +   NP N +EV P+  E
Sbjct: 139 LEVDPEFVEEQETGTMAKRKGRGRPKASNLLKKVKQSANVKTAVFDNPLNELEVDPKFVE 198

Query: 300 ESEDAVMPKEKGQGQPRGSMMQ 235
           E E   + K   +G+P+ S +Q
Sbjct: 199 EQETGTISKRNLRGRPKVSSLQ 220



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 54/142 (38%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
 Frame = -2

Query: 627 LDNPSNVLLEVDHGFIEEQETGTYGLSR----------QKNVKESADDEVFILDNPSNVF 478
           LDN SN L EVD  F+EEQETGT    +           K VK+SA+ +  + DNP N  
Sbjct: 132 LDNQSNEL-EVDPEFVEEQETGTMAKRKGRGRPKASNLLKKVKQSANVKTAVFDNPLNE- 189

Query: 477 LEVDPGFIEEQETDAYMXXXXXXXXXXRSRAQNCQESVHRNLSSHINPSNMVEVSPE-CE 301
           LEVDP F+EEQET               S  +  ++S     +   NPSN  EV  E  E
Sbjct: 190 LEVDPKFVEEQETGTISKRNLRGRPKVSSLQKQGKQSTIVKTAVLDNPSNEFEVDLEFIE 249

Query: 300 ESEDAVMPKEKGQGQPRGSMMQ 235
           E     + K K +G+P+ S +Q
Sbjct: 250 EQATGTIAKRKLRGRPKASSLQ 271



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
 Frame = -2

Query: 627 LDNPSNVLLEVDHGFIEEQETGTYGL----------SRQKNVKESADDEVFILDNPSNVF 478
           LDNPSN   EVD  FIEEQ TGT             S QK VK+SA+ +  +LDNPSN  
Sbjct: 234 LDNPSNEF-EVDLEFIEEQATGTIAKRKLRGRPKASSLQKQVKQSANVKPVVLDNPSN-D 291

Query: 477 LEVDPGFIEEQETDAYMXXXXXXXXXXRSRAQNCQESVHRNLSSHINPSNMVEVSPECEE 298
           LEVDP F+EE+ET +             S  +  +++ +       NPSN +EV+P+  +
Sbjct: 292 LEVDPKFVEEEETGSMAKRKGRCWPKVSSFQKKVKQNSNVETVVLNNPSNELEVAPDVVQ 351

Query: 297 SED 289
            ++
Sbjct: 352 EQE 354


Top