BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023785
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48593.1| unknown [Lotus japonicus]                              150   4e-34
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   150   5e-34
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                   143   5e-32
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   134   3e-29
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                   130   6e-28

>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score =  150 bits (379), Expect = 4e-34
 Identities = 89/239 (37%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
 Frame = -1

Query: 771 DFFTWQQRALDGSEVPRFVAGLWYAWCARNAKCIGGEDIPLQKILRDVKIME*AIARGFR 592
           D   W +  L  +  P  ++ LW+ W  RN  C+ G+ IP Q +  D+  M   IAR + 
Sbjct: 34  DSKAWLREVLKENS-PLVMSTLWWVWRLRNVWCMEGKLIPWQVLRGDILAMFDDIARCYA 92

Query: 591 FQ----HHTERTARWVT*HQSREDVVVLNVDGSAYGSLGRAGFGGLLRQGDGAWMLGFYG 424
                  HT R  RW        D VVLNVDGS +G+  R GFGG  R   G W+ GF+G
Sbjct: 93  VDVDAPMHTPRLVRWTV---GLADCVVLNVDGSVHGTPQRGGFGGCFRTIHGNWLRGFFG 149

Query: 423 XXXXXXXXXXXXAVLFFGLQTMWDYGVRRLVCYSDSSMALKLVRSSVNPRHYYAAWIGGV 244
                         +F GL   W+ G R + C SDS  A+ LV+S+ +  H YAA +  +
Sbjct: 150 YLDECCILHLELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDI 209

Query: 243 TKLLRRDWVVDLVHTLREGNGSAYVLAKLGASQTSKLIVVRSPPVELGAWLMANAMRIA 67
             L  RDW+V+L HTLREGN  A +L K GA Q   L++  +P   LG  L+A+A  ++
Sbjct: 210 KDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGLGVLLLADARGVS 268


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score =  150 bits (378), Expect = 5e-34
 Identities = 92/257 (35%), Positives = 137/257 (53%), Gaps = 2/257 (0%)
 Frame = -1

Query: 867  EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 688
            +E++ HC+RDC  SK IW  +G +   F    D   W +  L GS+   F AGLW+ W +
Sbjct: 599  DESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEIWCKSGLIGSKAILFAAGLWWIWRS 658

Query: 687  RNAKCIGGEDIPLQKILRDVKIME*AIARGFRFQHHTERTARWVT*HQSREDVVVLNVDG 508
            RNA+C+  E + LQ++  ++      I   F        + R+V  + S  +  +LNVDG
Sbjct: 659  RNARCMSEESMLLQRLAANITYFVDDINSCFFQPLPVMVSDRYVKWNNSNFNCTILNVDG 718

Query: 507  SAYGSLGRAGFGGLLRQGDGAWMLGFYG-XXXXXXXXXXXXAVLFFGLQTMWDYGVRRLV 331
            S  GS  RAGFGGL+R   G ++ GF G               ++ G+ T  D G+  + 
Sbjct: 719  SCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELTAIYDGINTAIDMGITDMA 778

Query: 330  CYSDSSMALKLVRSSVNPRHYYAAWIGGV-TKLLRRDWVVDLVHTLREGNGSAYVLAKLG 154
             YSDS +++ L+ ++ +  H +AA I  +  KL  R++   L HTLREGN SA  LAKLG
Sbjct: 779  VYSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLRNF--SLNHTLREGNQSADYLAKLG 836

Query: 153  ASQTSKLIVVRSPPVEL 103
            A     +++ +SPP EL
Sbjct: 837  AMSDVNVLIHQSPPDEL 853


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score =  143 bits (361), Expect = 5e-32
 Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 2/266 (0%)
 Frame = -1

Query: 867 EETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAWCA 688
           +ET +HCVRDC  S+ IW  +G T  +F  A     W +  +  S    F  GLW+AW  
Sbjct: 168 DETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRH 227

Query: 687 RNAKCIGGEDIPLQKILRDVKIME*AIARGFRFQHHTERTARWVT*HQSREDVVVLNVDG 508
           RN  C+  E + L ++  ++      I   F  + +   + R+V  +       +LNVDG
Sbjct: 228 RNLMCLNNETMSLFRLCNNIVSAATYIKSAFDSEENVNHSDRFVKWNNRNHHDHILNVDG 287

Query: 507 SAYGSLGRAGFGGLLRQGDGAWMLGFYG-XXXXXXXXXXXXAVLFFGLQTMWDYGVRRLV 331
           S  G+  R G+GG+LR   G ++ GF G               +   L  + D  +  ++
Sbjct: 288 SCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTAIHQSLHMVIDSNMNDVM 347

Query: 330 CYSDSSMALKLVRSSVNPRHYYAAWIGGVTKLLR-RDWVVDLVHTLREGNGSAYVLAKLG 154
           CYSDS +A+ L+ +     H YA  I  +  LL  R+  + L HTLREGN  A   AKLG
Sbjct: 348 CYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVRN--ITLHHTLREGNQCADFFAKLG 405

Query: 153 ASQTSKLIVVRSPPVELGAWLMANAM 76
           A+    L+V +SPP +L   L A+A+
Sbjct: 406 ANSDVHLVVHQSPPADLLPLLRADAI 431


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  134 bits (337), Expect = 3e-29
 Identities = 87/271 (32%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
 Frame = -1

Query: 873  QGEETLMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTWQQRALDGSEVPRFVAGLWYAW 694
            + +E+ +HCVRDC  S  IW  LG  +  F        W +    GS    F+AGLW++W
Sbjct: 1023 ENDESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDWIRNFSSGSRAITFLAGLWWSW 1082

Query: 693  CARNAKCIGGEDIPLQKI---LRD-VKIME*AIARGFRFQHHTERTARWVT*HQSREDVV 526
              RN  C+  E  PL +I   + D +  +  A  +    Q  + R  +W   +Q      
Sbjct: 1083 RHRNLMCLSNETWPLTRISFRINDSINAIRSAFVKSNVIQPDSARMVKW---NQGNHQCH 1139

Query: 525  VLNVDGSAYGSLGRAGFGGLLRQGDGAWMLGFYG-XXXXXXXXXXXXAVLFFGLQTMWDY 349
            +LNVDGS  G+  RAGFGG+ R   G ++ G+ G               L  GL    + 
Sbjct: 1140 ILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLIMAAEM 1199

Query: 348  GVRRLVCYSDSSMALKLVRSSVNPRHYYAAWIGGVTKLLRRDWVVDLVHTLREGNGSAYV 169
            G+  L CYSDS + + L+  + +  H YA  I  +  LL       + H  REGN  A  
Sbjct: 1200 GIEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGNQCADY 1258

Query: 168  LAKLGASQTSKLIVVRSPPVELGAWLMANAM 76
            LAKLGAS   + +V  S   EL   +  +A+
Sbjct: 1259 LAKLGASSNEECLVHASACQELLVLIQMDAI 1289


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score =  130 bits (326), Expect = 6e-28
 Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 4/217 (1%)
 Frame = -1

Query: 708 LWYAWCARNAKCIGGEDIP--LQKILRDVKIME*AIARGFRF--QHHTERTARWVT*HQS 541
           +W  WC+RN KCI  EDI   +Q+I   V      I + F     H  ++ AR V+  + 
Sbjct: 16  IWKIWCSRN-KCIF-EDIKHSIQEIGAQVLSSLHHILKAFAHPTSHSVQQPARIVSWQRP 73

Query: 540 REDVVVLNVDGSAYGSLGRAGFGGLLRQGDGAWMLGFYGXXXXXXXXXXXXAVLFFGLQT 361
             + V LNVDG+ +       FGGL+R    +++ GF+G            + L+ GL+ 
Sbjct: 74  SMNSVALNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPCILHVEISGLYHGLKL 133

Query: 360 MWDYGVRRLVCYSDSSMALKLVRSSVNPRHYYAAWIGGVTKLLRRDWVVDLVHTLREGNG 181
            WD G++ +VC+SDS+  + LV+  +N  H Y   I  + KLLRRDWVV L HTL EGN 
Sbjct: 134 CWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLCEGNA 193

Query: 180 SAYVLAKLGASQTSKLIVVRSPPVELGAWLMANAMRI 70
           +A  LAK GA   + L+++   P ++   L+A+A+ +
Sbjct: 194 AADFLAKKGALSDTSLVILNEAPPDIAFVLLADAVGV 230