BLASTX nr result
ID: Glycyrrhiza23_contig00023698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00023698
(660 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi... 317 1e-84
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi... 243 2e-62
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi... 221 1e-55
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,... 215 7e-54
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2... 214 9e-54
>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like [Glycine max]
Length = 1117
Score = 317 bits (813), Expect = 1e-84
Identities = 160/220 (72%), Positives = 185/220 (84%)
Frame = +1
Query: 1 QDFQLFSIVIKADNPSSISRLGYYEMMLWIRVNNEEMIRDICEYITVEDSEDTSALRESY 180
Q+FQLF+ +IK +NPSS SRLGYYEM+LW+RV NEEMIRDICEYITVE E+TSALRESY
Sbjct: 228 QEFQLFTDIIKTENPSSASRLGYYEMLLWLRVGNEEMIRDICEYITVEAREETSALRESY 287
Query: 181 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGRXXXXXXXXXXXXXXXXXXXX 360
L+ALCESDRK QI+DV+KNID+TKL+SA+SIA+IFQSLGR
Sbjct: 288 LMALCESDRKMQILDVVKNIDVTKLSSAKSIADIFQSLGRLHLESIADDLLLDLRACDHD 347
Query: 361 XXNISNFIASYAVSIPNLAVEDIISKFQNLHELLEVLPSSSSYVKLILYCCGLRKVDVAL 540
NISNFI SYAVSIPNLAVEDII KF+N+HELLEVLPS+SSY KLIL+CCGL KV +AL
Sbjct: 348 ADNISNFIVSYAVSIPNLAVEDIIPKFKNMHELLEVLPSTSSYEKLILHCCGLDKVGIAL 407
Query: 541 DIVDKMCESGFTLSSEVLQSILQICEETYDYILVHQIYSI 660
DIV+KMCE+GFTLS+EVLQ ILQICEE+Y+YILVH+IYSI
Sbjct: 408 DIVEKMCEAGFTLSTEVLQCILQICEESYEYILVHRIYSI 447
>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial [Glycine max]
Length = 755
Score = 243 bits (621), Expect = 2e-62
Identities = 121/219 (55%), Positives = 165/219 (75%)
Frame = +1
Query: 1 QDFQLFSIVIKADNPSSISRLGYYEMMLWIRVNNEEMIRDICEYITVEDSEDTSALRESY 180
++FQ F +VI+ +NPSS++RLGYYEM++W++ NNEE I+ IC+ I EDTS ++E+Y
Sbjct: 225 EEFQFFCVVIEDENPSSVARLGYYEMLMWLKDNNEEKIQGICDNIAENKGEDTSDIQENY 284
Query: 181 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGRXXXXXXXXXXXXXXXXXXXX 360
LLALCES+R +I+ +L+ IDI L+SAES+A +FQ+LGR
Sbjct: 285 LLALCESERMEEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPVAEKFLLDFKTSDHE 344
Query: 361 XXNISNFIASYAVSIPNLAVEDIISKFQNLHELLEVLPSSSSYVKLILYCCGLRKVDVAL 540
NI++FIASYAVSIP+L+V+D+I KF++LH+ LEV PSSSSY KLIL+ C L KV VAL
Sbjct: 345 ADNITDFIASYAVSIPDLSVKDVIKKFKDLHQRLEVSPSSSSYEKLILHSCALLKVHVAL 404
Query: 541 DIVDKMCESGFTLSSEVLQSILQICEETYDYILVHQIYS 657
DIVD+MCE+G TLS++VL SILQIC++T +Y LVH+I+S
Sbjct: 405 DIVDEMCEAGLTLSTKVLHSILQICDDTSEYNLVHRIFS 443
>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
mitochondrial-like [Glycine max]
Length = 705
Score = 221 bits (563), Expect = 1e-55
Identities = 118/226 (52%), Positives = 159/226 (70%), Gaps = 7/226 (3%)
Frame = +1
Query: 1 QDFQLFSIVIKADNPSSISRLGYYEMMLWIRVNNEEMIRDICEYITVEDSEDTSALRESY 180
++F+ F +VIK +NPSS++RLGYYEM+LW++ NNEE I+ IC+YI E+ EDTS +
Sbjct: 181 EEFKFFCVVIKDENPSSVTRLGYYEMLLWLKDNNEEKIQGICDYIA-ENDEDTSDI---- 235
Query: 181 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGRXXXXXXXXXXXXXXXXXXXX 360
CES+R +I+ +L+ IDI L+SAES+A +FQ+LGR
Sbjct: 236 ----CESERMKEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPLAEKFLLDFKTSDHE 291
Query: 361 XXNISNFIASYAVSIPNLA-------VEDIISKFQNLHELLEVLPSSSSYVKLILYCCGL 519
NI+NFIASYAVSIP+L+ VED+I KF++LH+ LEV PSSSSY KLIL+ C L
Sbjct: 292 ADNITNFIASYAVSIPDLSIRNISQMVEDVIKKFKDLHQRLEVSPSSSSYEKLILHSCAL 351
Query: 520 RKVDVALDIVDKMCESGFTLSSEVLQSILQICEETYDYILVHQIYS 657
+V VALDIVD+MCE+G TLS++ L SILQIC++T +Y LVH+I+S
Sbjct: 352 LEVHVALDIVDEMCEAGLTLSTKALHSILQICDDTSEYNLVHRIFS 397
>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 867
Score = 215 bits (547), Expect = 7e-54
Identities = 112/219 (51%), Positives = 149/219 (68%)
Frame = +1
Query: 4 DFQLFSIVIKADNPSSISRLGYYEMMLWIRVNNEEMIRDICEYITVEDSEDTSALRESYL 183
+F F I+ ++ SS++RLGYYEM+L IRVNNEE IR++C YI + +T L E+YL
Sbjct: 269 EFGSFCEAIEENDSSSLARLGYYEMLLCIRVNNEEKIRELCSYIANNNLNETFDLLENYL 328
Query: 184 LALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGRXXXXXXXXXXXXXXXXXXXXX 363
LALCE DRK +++ +L+ +DITK++S E + +IF SLGR
Sbjct: 329 LALCERDRKNELLQLLEIVDITKVSSLEHMVSIFNSLGRLLLESLAKKFLSTFKECDYDT 388
Query: 364 XNISNFIASYAVSIPNLAVEDIISKFQNLHELLEVLPSSSSYVKLILYCCGLRKVDVALD 543
NIS I SYA S+PNLAVED I KF+NLH +LE+ PSS SY KLI+Y C L KV ALD
Sbjct: 389 ENISTLIFSYATSVPNLAVEDAILKFKNLHVMLEMPPSSKSYEKLIIYSCDLLKVHAALD 448
Query: 544 IVDKMCESGFTLSSEVLQSILQICEETYDYILVHQIYSI 660
IVD+MC++ TLS +VL SIL+ CEE++++ LV QIYS+
Sbjct: 449 IVDQMCKADLTLSIDVLNSILRACEESFEFNLVQQIYSL 487
>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
predicted protein [Populus trichocarpa]
Length = 784
Score = 214 bits (546), Expect = 9e-54
Identities = 104/220 (47%), Positives = 153/220 (69%)
Frame = +1
Query: 1 QDFQLFSIVIKADNPSSISRLGYYEMMLWIRVNNEEMIRDICEYITVEDSEDTSALRESY 180
++F FS +IK NPS +RLGYY+M+L+I VN+EE I+++C YI ++D ++ +LRE+Y
Sbjct: 174 EEFHFFSDIIKDTNPSKNARLGYYDMLLYIGVNDEEKIQELCNYICIDDGDNNISLRENY 233
Query: 181 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGRXXXXXXXXXXXXXXXXXXXX 360
LLALCESD+K ++ +L+ +DITK +S + +A+IF+SLGR
Sbjct: 234 LLALCESDQKNYLLQLLETMDITKFSSLDHLASIFKSLGRLSLESFAKKFLLVLKSCDYG 293
Query: 361 XXNISNFIASYAVSIPNLAVEDIISKFQNLHELLEVLPSSSSYVKLILYCCGLRKVDVAL 540
+IS I SYA SIPNL VED++SKF+ LH ++++ PSS+SY KL++Y C L KV +AL
Sbjct: 294 AEDISTLIFSYATSIPNLVVEDVVSKFKTLHMIMKMSPSSTSYEKLVVYNCNLLKVHLAL 353
Query: 541 DIVDKMCESGFTLSSEVLQSILQICEETYDYILVHQIYSI 660
DIVD+MC+ G T+S + SIL EE++D+ LV +IYS+
Sbjct: 354 DIVDQMCKEGLTISINTIHSILNASEESFDFNLVRRIYSL 393