BLASTX nr result

ID: Glycyrrhiza23_contig00023692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023692
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602018.1| RING finger family protein [Medicago truncat...    88   8e-16
gb|AFK35856.1| unknown [Lotus japonicus]                               87   1e-15
ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002335928.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_003602018.1| RING finger family protein [Medicago truncatula]
           gi|355491066|gb|AES72269.1| RING finger family protein
           [Medicago truncatula]
          Length = 157

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
 Frame = +1

Query: 4   LKCNHTFHRDCLDKWLQQNWATCPLCRKXXXXXXXXXXXXQ---QLQNLEGGFDWNNNDE 174
           LKC HTFH+DCLDKWLQ  +ATCPLCR+            Q   Q  N+EG      NDE
Sbjct: 85  LKCKHTFHKDCLDKWLQDYFATCPLCREQVLPDNVVLKHRQQRNQQSNIEG------NDE 138

Query: 175 DLPYLLFALRGGNTSNLRR 231
           +LPY+LF LRGGN S+LRR
Sbjct: 139 NLPYVLFLLRGGNNSHLRR 157


>gb|AFK35856.1| unknown [Lotus japonicus]
          Length = 164

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/78 (55%), Positives = 47/78 (60%)
 Frame = +1

Query: 4   LKCNHTFHRDCLDKWLQQNWATCPLCRKXXXXXXXXXXXXQQLQNLEGGFDWNNNDEDLP 183
           LKC HTFH+DCLDKWLQ+ WATCPLCRK              L + E       N E LP
Sbjct: 94  LKCKHTFHKDCLDKWLQECWATCPLCRKQVLPCDVVSKHRHFLSHEE-------NVEHLP 146

Query: 184 YLLFALRGGNTSNLRRYL 237
           YLLF  RGGN SN RRY+
Sbjct: 147 YLLFVWRGGNGSNFRRYV 164


>ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|222855783|gb|EEE93330.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = +1

Query: 4   LKCNHTFHRDCLDKWLQQNWATCPLCRKXXXXXXXXXXXXQQLQNLEGGFDWNNNDEDLP 183
           LKC HTFH+DCLD+WLQQ  ATCPLCR              +   ++   +++ +DE++ 
Sbjct: 79  LKCKHTFHKDCLDEWLQQCLATCPLCR----AKVLPDEILAKYDRMQSQIEYDGSDEEMI 134

Query: 184 YLLFALRGGNTSNL 225
           ++L AL G +   +
Sbjct: 135 FMLSALHGNSLQRI 148


>ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 4   LKCNHTFHRDCLDKWLQQNWATCPLCRKXXXXXXXXXXXXQQLQNLEGGFDWNNNDEDLP 183
           L C HTFH+DCLDKWLQQ+ ATCPLCR              ++QN + G+D  +++E  P
Sbjct: 92  LNCKHTFHKDCLDKWLQQSLATCPLCR-AKVLPDEIVAKYDRMQN-QIGYD-GSDEEMAP 148

Query: 184 YLLFALRGGNTSNL 225
           +LL AL G     +
Sbjct: 149 FLLSALHGNGLQRI 162


>ref|XP_002335928.1| predicted protein [Populus trichocarpa] gi|222836416|gb|EEE74823.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 4   LKCNHTFHRDCLDKWLQQNWATCPLCRKXXXXXXXXXXXXQQLQNLEGGFDWNNNDEDLP 183
           L C HTFH+DCLDKWLQQ+ ATCPLCR              ++QN + G+D  +++E  P
Sbjct: 39  LNCKHTFHKDCLDKWLQQSLATCPLCR-AKVLPDEIVAKYDRMQN-QIGYD-GSDEEMAP 95

Query: 184 YLLFALRGGNTSNL 225
           +LL AL G     +
Sbjct: 96  FLLSALHGNGLQRI 109


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