BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023671
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago t...   187   9e-46
ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago t...   186   3e-45
ref|XP_002531032.1| pentatricopeptide repeat-containing protein,...   148   6e-34
ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   101   6e-20

>ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355523910|gb|AET04364.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 515

 Score =  187 bits (475), Expect = 9e-46
 Identities = 102/182 (56%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
 Frame = -3

Query: 538 PSPTVFDFNXXXXXXXXXXXXXXXXSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQ 359
           P+P +FD+N                 VF +ML T +RPNSHTFT L KAC  VSLSSL+Q
Sbjct: 49  PNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKAC--VSLSSLEQ 106

Query: 358 VRAQAMKXXXXXXXXXXXXXXXXXSKHGEIHDARRVFDESPNRNVVCWTSLVSGYCGCGL 179
           V   +MK                 SKH  IH AR+VFDE  NRNVVCWTSLVSGYC CGL
Sbjct: 107 VFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGL 166

Query: 178 VNEARDLFDAMPQRNDASYSAMVSGYVGNGCFGEGIELFRDLK---RSFARVRPNGPLLV 8
           VNEARD+FD MP RN+ASYSAMVSGYV NG F EG++LFR+LK   +  A ++ NG LLV
Sbjct: 167 VNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLV 226

Query: 7   SV 2
           SV
Sbjct: 227 SV 228


>ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355492766|gb|AES73969.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 629

 Score =  186 bits (471), Expect = 3e-45
 Identities = 102/182 (56%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
 Frame = -3

Query: 538 PSPTVFDFNXXXXXXXXXXXXXXXXSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQ 359
           P+P +FD+N                SVF +ML   +RPNSHTFT L K+C  V+LSSL+Q
Sbjct: 85  PNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSC--VTLSSLEQ 142

Query: 358 VRAQAMKXXXXXXXXXXXXXXXXXSKHGEIHDARRVFDESPNRNVVCWTSLVSGYCGCGL 179
           V    MK                 SKHG IH AR+VFDES NRNVVCWTSLVSGYC CGL
Sbjct: 143 VFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGL 202

Query: 178 VNEARDLFDAMPQRNDASYSAMVSGYVGNGCFGEGIELFRDLK---RSFARVRPNGPLLV 8
           VNE RD+FD MPQRN+AS SAMVSGYV N  F EG++LFR+LK   +  ARV+ NG LLV
Sbjct: 203 VNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLV 262

Query: 7   SV 2
           SV
Sbjct: 263 SV 264


>ref|XP_002531032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529385|gb|EEF31349.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 392

 Score =  148 bits (373), Expect = 6e-34
 Identities = 85/179 (47%), Positives = 106/179 (59%)
 Frame = -3

Query: 538 PSPTVFDFNXXXXXXXXXXXXXXXXSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQ 359
           P P+ FDFN                S+F +M +  +  N+HTFT+L K C C+SL  L Q
Sbjct: 72  PLPSSFDFNSMILGFSQNSLSQKGISLFARMNSIRIETNTHTFTSLLKCCFCLSL--LDQ 129

Query: 358 VRAQAMKXXXXXXXXXXXXXXXXXSKHGEIHDARRVFDESPNRNVVCWTSLVSGYCGCGL 179
           V  Q +K                 SKHG +  AR+VFDES + NVVCWTSL+SG C  GL
Sbjct: 130 VHCQILKYGYKSDVYINSSVISMYSKHGAVEYARQVFDESSDTNVVCWTSLISGCCINGL 189

Query: 178 VNEARDLFDAMPQRNDASYSAMVSGYVGNGCFGEGIELFRDLKRSFARVRPNGPLLVSV 2
           ++EAR++FD MP+RN+ SYSAMVSG+V NG F E I LFR+LK     VR N  LLVSV
Sbjct: 190 IDEAREMFDRMPERNEVSYSAMVSGFVRNGFFNEAIALFRELK-ICGNVRFNASLLVSV 247


>ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 522

 Score =  142 bits (358), Expect = 3e-32
 Identities = 84/181 (46%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
 Frame = -3

Query: 538 PSPTVFDFNXXXXXXXXXXXXXXXXSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQ 359
           P P +FD+N                  F QML   V PNS TF+ L    +  SL  L Q
Sbjct: 62  PFPNLFDYNTIITAFSPHYSSLF----FIQMLNAAVSPNSRTFSLLLSKSS-PSLPFLHQ 116

Query: 358 VRAQAMKXXXXXXXXXXXXXXXXXSKHGEIHDARRVFDESPNRNVVCWTSLVSGYCGCGL 179
           + +  ++                 S HG    ARR+FD+SP +NV CWTSLV+GYC  GL
Sbjct: 117 LHSHIIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNGL 176

Query: 178 VNEARDLFDAMP--QRNDASYSAMVSGYVGNGCFGEGIELFRDLKRSFARVRPNGPLLVS 5
           VN+AR+LFDA+P  +RND SYSAMVSGYV NGCF EGI+LFR+LK     V+PN  LL S
Sbjct: 177 VNDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKD--RNVKPNNSLLAS 234

Query: 4   V 2
           V
Sbjct: 235 V 235


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 MLTTGVRPNSHTFTALAKACA-CVSLSSLQQVRAQAMKXXXXXXXXXXXXXXXXXSKHGE 272
           M++ G+ PNS+TF  L K+CA   +    QQ+    +K                  ++G 
Sbjct: 82  MISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 141

Query: 271 IHDARRVFDESPNRNVVCWTSLVSGYCGCGLVNEARDLFDAMPQRNDASYSAMVSGYVGN 92
           + DA +VFDESP+R+VV +T+L+ GY   G +  A+ +FD +P ++  S++AM+SGY   
Sbjct: 142 LEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAET 201

Query: 91  GCFGEGIELFRDLKRSFARVRPNGPLLVSV 2
           G + E +ELF+D+ ++   VRP+   +V+V
Sbjct: 202 GNYKEALELFKDMMKT--NVRPDESTMVTV 229