BLASTX nr result

ID: Glycyrrhiza23_contig00023642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023642
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-51
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   172   3e-41
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinu...   169   2e-40
ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   152   4e-35

>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  204 bits (519), Expect = 6e-51
 Identities = 102/120 (85%), Positives = 110/120 (91%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 KAALSLFRDLQN---HNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLG 182
           KAALSLFR LQ      LRPNEFTMS+VLSACARLGALQHGKWVHAYIDK+GMK+DVVLG
Sbjct: 174 KAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLG 233

Query: 181 TSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKMVNDG 2
           TSLIDMYAKCGSIERAKCIFD++GPE KD+MAWSAMITA +MHGLS ECLELFA+MVNDG
Sbjct: 234 TSLIDMYAKCGSIERAKCIFDNLGPE-KDVMAWSAMITAFSMHGLSEECLELFARMVNDG 292


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/120 (68%), Positives = 102/120 (85%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 KAALSLFRDLQN---HNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLG 182
           K AL+LFR++Q    +++RPNEFTMS VL+AC RLGAL+HGKW HAYIDK GM VDVVLG
Sbjct: 178 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 237

Query: 181 TSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKMVNDG 2
           T+LIDMYAKCGS+E+A  +F ++GP NKD+MAWSAMI+ LAMHGL+ EC+ LF+KM+N G
Sbjct: 238 TALIDMYAKCGSVEKATWVFSNLGP-NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG 296



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/110 (32%), Positives = 61/110 (55%)
 Frame = -2

Query: 343 LSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLGTSLIDM 164
           +S+F  ++ H ++P+  T   +L + A    L  G+ VHA I + G+ +D  + TSLI M
Sbjct: 49  ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108

Query: 163 YAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKM 14
           Y+ CG++  A+ +FD +     D+ +W+++I A    GL      LFA M
Sbjct: 109 YSSCGNLGFARQVFDEI--PQPDLPSWNSIINANFQAGLVDMARNLFAVM 156


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/120 (68%), Positives = 102/120 (85%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 KAALSLFRDLQN---HNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLG 182
           K AL+LFR++Q    +++RPNEFTMS VL+AC RLGAL+HGKW HAYIDK GM VDVVLG
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206

Query: 181 TSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKMVNDG 2
           T+LIDMYAKCGS+E+A  +F ++GP NKD+MAWSAMI+ LAMHGL+ EC+ LF+KM+N G
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGP-NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG 265



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = -2

Query: 343 LSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLGTSLIDM 164
           +S+F  ++ H ++P+  T   +L + A    L  G+ VHA I + G+ +D  + TSLI M
Sbjct: 49  ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108

Query: 163 YAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKM----VND 5
           Y+  G ++ A+ +F  M PE +++++WS MI      G   E L LF +M    VND
Sbjct: 109 YSSSGLVDMARNLFAVM-PE-RNVISWSCMINGYVRCGQYKEALALFREMQMLGVND 163


>ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinus communis]
           gi|223537653|gb|EEF39276.1| magnesium/proton exchanger,
           putative [Ricinus communis]
          Length = 1015

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 KAALSLFRDLQN---HNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLG 182
           K AL+LFR++Q     +++PNEFTMS+VLSAC RLGAL+HGKW HAYI+K  MK+D+VLG
Sbjct: 195 KEALALFREMQMLEVRDVKPNEFTMSSVLSACGRLGALEHGKWAHAYIEKCEMKIDIVLG 254

Query: 181 TSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKMVNDG 2
           TSLIDMYAKCGSI+RA+ +FD++G  NKD+MAWSAMI+ LAMHG   E LELF+KMVN G
Sbjct: 255 TSLIDMYAKCGSIDRARLVFDNLG-SNKDVMAWSAMISGLAMHGYGEEGLELFSKMVNQG 313


>ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g62890-like [Glycine max]
          Length = 567

 Score =  152 bits (383), Expect = 4e-35
 Identities = 83/120 (69%), Positives = 90/120 (75%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 KAALSLFRDLQN---HNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKSGMKVDVVLG 182
           KAALSLFR LQ      ++PNE         CARLGAL+HGKWVHAYIDK+GMK+DVVLG
Sbjct: 172 KAALSLFRSLQTLEGSKVQPNEX--------CARLGALEHGKWVHAYIDKTGMKIDVVLG 223

Query: 181 TSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLELFAKMVNDG 2
           TSLIDMYAKCG I          GPE KD+MAWSAMITA AMHGLS ECLELFA+MVNDG
Sbjct: 224 TSLIDMYAKCGXI---------FGPE-KDVMAWSAMITAFAMHGLSEECLELFARMVNDG 273


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