BLASTX nr result

ID: Glycyrrhiza23_contig00023636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023636
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552784.1| PREDICTED: uncharacterized protein LOC100794...   104   9e-21
ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806...   102   4e-20
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    79   4e-13
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...    78   7e-13
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    78   7e-13

>ref|XP_003552784.1| PREDICTED: uncharacterized protein LOC100794048 [Glycine max]
          Length = 1825

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/61 (81%), Positives = 57/61 (93%)
 Frame = +2

Query: 290 EEVEGDGIETSDYFFVKIGESLPLKANDSNFDLQTLPSQPLALSERFRLTFVAHSSGFYV 469
           EEVEG+ I TSDYFFVK+GE+LPLK++DS FD +TLPSQPLALSERFRLTFVAHSSGF+V
Sbjct: 10  EEVEGEMISTSDYFFVKVGEALPLKSSDSVFDAETLPSQPLALSERFRLTFVAHSSGFFV 69

Query: 470 A 472
           A
Sbjct: 70  A 70


>ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806517 [Glycine max]
          Length = 1744

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/61 (80%), Positives = 57/61 (93%)
 Frame = +2

Query: 290 EEVEGDGIETSDYFFVKIGESLPLKANDSNFDLQTLPSQPLALSERFRLTFVAHSSGFYV 469
           EEVEG+ I T+DYFFVK+GE+LPLK++DS FD +TLPSQPLALSERFRLTFVAHSSGF+V
Sbjct: 10  EEVEGEIIGTTDYFFVKVGEALPLKSSDSVFDAETLPSQPLALSERFRLTFVAHSSGFFV 69

Query: 470 A 472
           A
Sbjct: 70  A 70


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
           lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
           ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = +2

Query: 272 MGLVNIEE-VEGDGIETSDYFFVKIGESLPLKANDSNFDLQTLPSQPLALSERFRLTFVA 448
           M  V IEE +EGD I T+DY+F KIGE + +K +D+ +D++  PSQPLA+SER  + FVA
Sbjct: 1   MSKVEIEEDMEGDRISTNDYYFEKIGEPISIKEDDAQYDIENPPSQPLAISERHGVVFVA 60

Query: 449 HSSGFYV 469
           HSSGF+V
Sbjct: 61  HSSGFFV 67


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
           gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
           [Arabidopsis thaliana]
          Length = 1819

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = +2

Query: 272 MGLVNIEE-VEGDGIETSDYFFVKIGESLPLKANDSNFDLQTLPSQPLALSERFRLTFVA 448
           M  V IEE  EGD I T+DY+F +IGE + +K +D+ +DL+  PSQPLA+SER  + FVA
Sbjct: 1   MSRVEIEEDTEGDRISTNDYYFERIGEPISIKEDDAQYDLENPPSQPLAISERHAVLFVA 60

Query: 449 HSSGFYV 469
           HSSGF+V
Sbjct: 61  HSSGFFV 67


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
           gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
           [Arabidopsis thaliana]
          Length = 1816

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = +2

Query: 272 MGLVNIEE-VEGDGIETSDYFFVKIGESLPLKANDSNFDLQTLPSQPLALSERFRLTFVA 448
           M  V IEE  EGD I T+DY+F +IGE + +K +D+ +DL+  PSQPLA+SER  + FVA
Sbjct: 1   MSRVEIEEDTEGDRISTNDYYFERIGEPISIKEDDAQYDLENPPSQPLAISERHAVLFVA 60

Query: 449 HSSGFYV 469
           HSSGF+V
Sbjct: 61  HSSGFFV 67


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