BLASTX nr result

ID: Glycyrrhiza23_contig00023618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023618
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-...   239   1e-61
gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein...   236   1e-60
ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicag...   236   1e-60
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...   236   2e-60
emb|CBI38730.3| unnamed protein product [Vitis vinifera]              207   9e-52

>ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score =  239 bits (611), Expect = 1e-61
 Identities = 115/121 (95%), Positives = 117/121 (96%)
 Frame = -3

Query: 404  EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQNHINMTIKGKLM 225
            EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQ HINMT  GKLM
Sbjct: 1183 EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLM 1242

Query: 224  MADTCTYAEDLVGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 45
            MADTCT AEDL+G+IVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK
Sbjct: 1243 MADTCTNAEDLIGKIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 1302

Query: 44   Q 42
            Q
Sbjct: 1303 Q 1303


>gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
            III, bacterial [Medicago truncatula]
          Length = 1939

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/121 (92%), Positives = 118/121 (97%)
 Frame = -3

Query: 404  EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQNHINMTIKGKLM 225
            EYGFGKLRHG+AFGQKSHPTYGIRGAVAQFDVVKASGLVPNRD+M+TQNHINMT KGKLM
Sbjct: 1115 EYGFGKLRHGLAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDSMETQNHINMTTKGKLM 1174

Query: 224  MADTCTYAEDLVGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 45
            MADTCT  +DLVGRIVTAAHSGKRFYVDSIRY+M+AENSFPRKEGYLGPLEYSSYADYYK
Sbjct: 1175 MADTCTSPDDLVGRIVTAAHSGKRFYVDSIRYEMTAENSFPRKEGYLGPLEYSSYADYYK 1234

Query: 44   Q 42
            Q
Sbjct: 1235 Q 1235


>ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 1965

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/121 (92%), Positives = 118/121 (97%)
 Frame = -3

Query: 404  EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQNHINMTIKGKLM 225
            EYGFGKLRHG+AFGQKSHPTYGIRGAVAQFDVVKASGLVPNRD+M+TQNHINMT KGKLM
Sbjct: 1147 EYGFGKLRHGLAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDSMETQNHINMTTKGKLM 1206

Query: 224  MADTCTYAEDLVGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 45
            MADTCT  +DLVGRIVTAAHSGKRFYVDSIRY+M+AENSFPRKEGYLGPLEYSSYADYYK
Sbjct: 1207 MADTCTSPDDLVGRIVTAAHSGKRFYVDSIRYEMTAENSFPRKEGYLGPLEYSSYADYYK 1266

Query: 44   Q 42
            Q
Sbjct: 1267 Q 1267


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/121 (95%), Positives = 115/121 (95%)
 Frame = -3

Query: 404  EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQNHINMTIKGKLM 225
            EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQ HINMT  GKLM
Sbjct: 1185 EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLM 1244

Query: 224  MADTCTYAEDLVGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 45
            MAD CT AEDLVGRIVTAAHSGKRFYVDSI YDMSAENSFPRKEGYLGPLEYSSYADYYK
Sbjct: 1245 MADICTNAEDLVGRIVTAAHSGKRFYVDSICYDMSAENSFPRKEGYLGPLEYSSYADYYK 1304

Query: 44   Q 42
            Q
Sbjct: 1305 Q 1305


>emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/121 (83%), Positives = 111/121 (91%)
 Frame = -3

Query: 404  EYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQNHINMTIKGKLM 225
            EYGFGKLRHGMAFGQKSHPTYGIRGAVAQ+DVV+ASGLVPNR+ ++     ++T KGKLM
Sbjct: 1150 EYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEMMKGEDLT-KGKLM 1208

Query: 224  MADTCTYAEDLVGRIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYK 45
            MA T T AEDLVGRIVTAAHSGKRFYVDS+RYDM+AENSFPRKEGYLGPLEYSSYADYY+
Sbjct: 1209 MAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYR 1268

Query: 44   Q 42
            Q
Sbjct: 1269 Q 1269


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