BLASTX nr result
ID: Glycyrrhiza23_contig00023610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00023610
(699 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 305 8e-81
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa... 301 6e-80
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu... 301 6e-80
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl... 300 2e-79
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2... 284 1e-74
>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
vinifera]
Length = 1316
Score = 305 bits (780), Expect = 8e-81
Identities = 161/233 (69%), Positives = 187/233 (80%)
Frame = -1
Query: 699 VKSRLGXXXXXXXXXXKANDTELKMAWDCYMNANDNWKNTEAKIQAKREIKSGIIKRIEE 520
+K+RL K+ + ELK+AWD YM+AND+WK+ EA+ QAK EIKSGI+KRIEE
Sbjct: 401 IKTRLMDLEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEE 460
Query: 519 KKNEHDSFELQISNEDFSHIDERERNLQIEVERKTKQLAEREFEPNIRQMQSELYSVDQK 340
K+NE DSFELQISN SHIDERE+NL+IEVERKT QLAEREFE NIRQ QSELYS++QK
Sbjct: 461 KENERDSFELQISNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQK 520
Query: 339 IKAVNREKDIMASDSEDRVKLSLKKAELENXXXXXXXXXXXXXXXIRRVLKGRIPPDKDV 160
IKA+NREKDIMA DSEDRVKLSLKK ELEN IR VLKGR+PPDKD+
Sbjct: 521 IKALNREKDIMAVDSEDRVKLSLKKGELENHKKKHQKIMDEYKDRIRGVLKGRLPPDKDL 580
Query: 159 KKEITQALRSVGAEFDDLNAKYREAEKEVNMLQMKIQEANSNLSKHHKDMESR 1
KKEITQALR++G EFDD+N+K REAEKEVNMLQMKI+E N+NLSK +KDM+SR
Sbjct: 581 KKEITQALRALGIEFDDMNSKSREAEKEVNMLQMKIEEVNNNLSKLNKDMDSR 633
>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 1088
Score = 301 bits (772), Expect = 6e-80
Identities = 155/233 (66%), Positives = 181/233 (77%)
Frame = -1
Query: 699 VKSRLGXXXXXXXXXXKANDTELKMAWDCYMNANDNWKNTEAKIQAKREIKSGIIKRIEE 520
+K RL +ND ELK AWDCYM+AND WKN +A+ AK +IK GI+KRIEE
Sbjct: 173 IKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEE 232
Query: 519 KKNEHDSFELQISNEDFSHIDERERNLQIEVERKTKQLAEREFEPNIRQMQSELYSVDQK 340
K++E DSFELQIS+ D SHIDERE+N+QIEVERKT QLAEREFE IRQ QS+LY ++QK
Sbjct: 233 KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQK 292
Query: 339 IKAVNREKDIMASDSEDRVKLSLKKAELENXXXXXXXXXXXXXXXIRRVLKGRIPPDKDV 160
IKAVNREKDIMA DSEDRVKL+LKKAEL+N IR VLKGR PP+KD+
Sbjct: 293 IKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDL 352
Query: 159 KKEITQALRSVGAEFDDLNAKYREAEKEVNMLQMKIQEANSNLSKHHKDMESR 1
KKEITQALR+VG E+DDLN+K REAEK+VNMLQMKIQE N NLS++ K+MESR
Sbjct: 353 KKEITQALRAVGMEYDDLNSKSREAEKDVNMLQMKIQEVNHNLSRYQKEMESR 405
>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
Length = 1316
Score = 301 bits (772), Expect = 6e-80
Identities = 155/233 (66%), Positives = 181/233 (77%)
Frame = -1
Query: 699 VKSRLGXXXXXXXXXXKANDTELKMAWDCYMNANDNWKNTEAKIQAKREIKSGIIKRIEE 520
+K RL +ND ELK AWDCYM+AND WKN +A+ AK +IK GI+KRIEE
Sbjct: 401 IKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEE 460
Query: 519 KKNEHDSFELQISNEDFSHIDERERNLQIEVERKTKQLAEREFEPNIRQMQSELYSVDQK 340
K++E DSFELQIS+ D SHIDERE+N+QIEVERKT QLAEREFE IRQ QS+LY ++QK
Sbjct: 461 KESERDSFELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQK 520
Query: 339 IKAVNREKDIMASDSEDRVKLSLKKAELENXXXXXXXXXXXXXXXIRRVLKGRIPPDKDV 160
IKAVNREKDIMA DSEDRVKL+LKKAEL+N IR VLKGR PP+KD+
Sbjct: 521 IKAVNREKDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDL 580
Query: 159 KKEITQALRSVGAEFDDLNAKYREAEKEVNMLQMKIQEANSNLSKHHKDMESR 1
KKEITQALR+VG E+DDLN+K REAEK+VNMLQMKIQE N NLS++ K+MESR
Sbjct: 581 KKEITQALRAVGMEYDDLNSKSREAEKDVNMLQMKIQEVNHNLSRYQKEMESR 633
>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
Length = 1316
Score = 300 bits (767), Expect = 2e-79
Identities = 160/233 (68%), Positives = 183/233 (78%)
Frame = -1
Query: 699 VKSRLGXXXXXXXXXXKANDTELKMAWDCYMNANDNWKNTEAKIQAKREIKSGIIKRIEE 520
VKSRL KAND E+KMA+DCYMNAND K+TEAKI+A KSGI KRIEE
Sbjct: 401 VKSRLEDLEKDLDDKKKANDNEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRIEE 460
Query: 519 KKNEHDSFELQISNEDFSHIDERERNLQIEVERKTKQLAEREFEPNIRQMQSELYSVDQK 340
KKNE DS ELQIS+E+FS +DERERNL+ EV+RK QL ER+FEPN +++ E+YSVDQK
Sbjct: 461 KKNELDSLELQISDENFSQLDERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVDQK 520
Query: 339 IKAVNREKDIMASDSEDRVKLSLKKAELENXXXXXXXXXXXXXXXIRRVLKGRIPPDKDV 160
IKAV+REKDIM SDS+DRVKLS KK ELE+ IR+VLKGR+P DKDV
Sbjct: 521 IKAVSREKDIMVSDSQDRVKLSYKKGELESQKKKHKKIIDEQKDKIRKVLKGRVPLDKDV 580
Query: 159 KKEITQALRSVGAEFDDLNAKYREAEKEVNMLQMKIQEANSNLSKHHKDMESR 1
KKEI QALR+VGAEFDDLNAKYREAEKEVN+LQ+KIQE NSNLSKHHKD+ESR
Sbjct: 581 KKEIMQALRAVGAEFDDLNAKYREAEKEVNVLQVKIQEVNSNLSKHHKDLESR 633
>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
predicted protein [Populus trichocarpa]
Length = 1316
Score = 284 bits (727), Expect = 1e-74
Identities = 148/233 (63%), Positives = 177/233 (75%)
Frame = -1
Query: 699 VKSRLGXXXXXXXXXXKANDTELKMAWDCYMNANDNWKNTEAKIQAKREIKSGIIKRIEE 520
+KSRL +NDTE+K A +CY +AN+ WKNTEA+ QAK EIK+ I+ RI E
Sbjct: 401 LKSRLVDLDKDLQDKKTSNDTEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNRITE 460
Query: 519 KKNEHDSFELQISNEDFSHIDERERNLQIEVERKTKQLAEREFEPNIRQMQSELYSVDQK 340
K+ EH SFE QIS+ + SHIDE+E+N++IEVERKT QLAEREFE +IRQ QSELY ++Q+
Sbjct: 461 KEREHSSFEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQ 520
Query: 339 IKAVNREKDIMASDSEDRVKLSLKKAELENXXXXXXXXXXXXXXXIRRVLKGRIPPDKDV 160
IK +NREKDI+A DSEDRVKLSLKK ELEN IR VLKGR+PPDKD+
Sbjct: 521 IKVLNREKDILAGDSEDRVKLSLKKVELENHKKKHRKIIDECKDKIRGVLKGRLPPDKDL 580
Query: 159 KKEITQALRSVGAEFDDLNAKYREAEKEVNMLQMKIQEANSNLSKHHKDMESR 1
KKEITQ LR++G EFDDLN K REAEKEVN+LQMKIQE N+NLSK KDM+SR
Sbjct: 581 KKEITQTLRALGLEFDDLNMKSREAEKEVNVLQMKIQEVNNNLSKQRKDMDSR 633