BLASTX nr result

ID: Glycyrrhiza23_contig00023553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023553
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago ...    79   5e-13
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    72   6e-11
gb|ABN05702.1| reverse transcriptase - beet retrotransposon, put...    65   4e-09
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-08
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   8e-08

>ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago truncatula]
           gi|355500907|gb|AES82110.1| hypothetical protein
           MTR_7g108440 [Medicago truncatula]
          Length = 848

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = -2

Query: 319 DMLCLLKTKMEGVDRKVCSLLREGDDFEWLAQSAEGRSGGLIILWRKG-SFILSCEFQGF 143
           D L + KTK+E +   +C  L   DD +W    +EG SGG++ LWRK  +  +SC F G 
Sbjct: 595 DFLAIQKTKLEDISSALCYNLWGSDDCQWYFHPSEGNSGGILSLWRKSYANEVSC-FGGD 653

Query: 142 NFIGVEGLWGNNRNSITIVNIYAPCDGRGKRNLCEAVLNQMGIRG 8
            ++GV   WG  R+   ++N+Y  CD   KR L EA+L +   RG
Sbjct: 654 GYVGVCFEWGVLRHKCIVINVYVKCDSMSKRRLWEAILEERCQRG 698


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/92 (38%), Positives = 49/92 (53%)
 Frame = -2

Query: 319 DMLCLLKTKMEGVDRKVCSLLREGDDFEWLAQSAEGRSGGLIILWRKGSFILSCEFQGFN 140
           D++C+ +TK E VD+ +C  +       W    +   SGGL+ +W    F +    +G +
Sbjct: 673 DLVCIQETKKESVDKLICQSIWGDSSVSWDFVPSVQASGGLLCMWNNSHFQVERRIKGGS 732

Query: 139 FIGVEGLWGNNRNSITIVNIYAPCDGRGKRNL 44
           FI +EG W      I IVNIYAPCD  GKR L
Sbjct: 733 FIMLEGKWVEEDQWIQIVNIYAPCDLAGKRTL 764


>gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 384

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/88 (34%), Positives = 47/88 (53%)
 Frame = -2

Query: 292 MEGVDRKVCSLLREGDDFEWLAQSAEGRSGGLIILWRKGSFILSCEFQGFNFIGVEGLWG 113
           ME +    C+ +   DDF+W    +E  SGG++ +WRK    L   F G  F+GV   WG
Sbjct: 1   MEVISAPFCASIWGNDDFDWAFLPSESNSGGILSIWRKSMATLYYTFTGEGFVGVFLEWG 60

Query: 112 NNRNSITIVNIYAPCDGRGKRNLCEAVL 29
             +    I+N+Y+ CD + K+ L E ++
Sbjct: 61  AKKIKCIIINVYSKCDLQSKKRLWERLV 88


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/110 (30%), Positives = 53/110 (48%)
 Frame = -2

Query: 382 KGPGGRXXXXXXXXXXXXXKPDMLCLLKTKMEGVDRKVCSLLREGDDFEWLAQSAEGRSG 203
           +G G R             KP  L + ++K E ++ K+   +   DD EWL   + G SG
Sbjct: 9   RGIGAREKRSQTRKLINTHKPSFLFIQESKSENINPKIIKTIWHNDDIEWLFSPSVGNSG 68

Query: 202 GLIILWRKGSFILSCEFQGFNFIGVEGLWGNNRNSITIVNIYAPCDGRGK 53
           GLI +W K +F +       N+I ++G   + R    ++NIY PC+  G+
Sbjct: 69  GLISIWEKSAFQMESSHIQRNWIAIQGSIVHPRFRCLLINIYNPCNIEGR 118


>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/86 (31%), Positives = 45/86 (52%)
 Frame = -2

Query: 322 PDMLCLLKTKMEGVDRKVCSLLREGDDFEWLAQSAEGRSGGLIILWRKGSFILSCEFQGF 143
           P  + + +TKM+ + +K      + DD EW+   A G SGG+I LW K SF ++      
Sbjct: 29  PTFVFIQETKMDDITKKSVKTYWKADDVEWIFSPAAGNSGGIISLWNKSSFTMASTKIAR 88

Query: 142 NFIGVEGLWGNNRNSITIVNIYAPCD 65
           +++ + G         T++N+Y PCD
Sbjct: 89  SWMAISGCLHEVNYECTLINVYNPCD 114


Top