BLASTX nr result

ID: Glycyrrhiza23_contig00023542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023542
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528493.1| PREDICTED: uncharacterized protein C3B8.09-l...   103   1e-20
ref|XP_003520178.1| PREDICTED: uncharacterized protein LOC100812...    95   7e-18
ref|XP_003608060.1| Something about silencing protein [Medicago ...    85   5e-15
ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [A...    84   9e-15
emb|CBI24668.3| unnamed protein product [Vitis vinifera]               84   9e-15

>ref|XP_003528493.1| PREDICTED: uncharacterized protein C3B8.09-like [Glycine max]
          Length = 668

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/112 (53%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +3

Query: 105 MGKSKGRSHQKKDVIKN-AKTSSRYQRDAFESDDMDDEIDAFHKQRDIVPLDVNGDAGES 281
           MGK +G ++QKKD   + +KTSSR+    + SDDMDDEIDAFHKQRDIVPLD+N DA ES
Sbjct: 1   MGKKRGTNYQKKDTKSSKSKTSSRHA--TYSSDDMDDEIDAFHKQRDIVPLDINDDAEES 58

Query: 282 DEDDELPVFXXXXXXXXXXXXXXXXXXXXXXXXXXVAKMIRQGKHLRAKFGG 437
            ED+ELP+F                          VAKMIRQ K+LRAKFGG
Sbjct: 59  -EDEELPIFDVQDVDEDEDEDEDDEDDDDDDGDDDVAKMIRQRKYLRAKFGG 109


>ref|XP_003520178.1| PREDICTED: uncharacterized protein LOC100812322 [Glycine max]
          Length = 673

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 55/117 (47%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
 Frame = +3

Query: 105 MGKSKGRSHQKKDVIKNAKTSSRYQRDAFESDDMDDEIDAFHKQRDIVPLDVNGDAGESD 284
           MGK +G S+QKKD  K++K+ +  +  A+ SDDMDD+ID FHKQRDIVPLD+N DA ES 
Sbjct: 1   MGKKRGTSYQKKDA-KSSKSKTSSRHGAYSSDDMDDDIDTFHKQRDIVPLDINDDAEES- 58

Query: 285 EDDELPVF------XXXXXXXXXXXXXXXXXXXXXXXXXXVAKMIRQGKHLRAKFGG 437
           ED+ELP+F                                VAKMIRQ K+L+ KFGG
Sbjct: 59  EDEELPIFDVQVLVDIDEDEDDEDEDDGEDDDDDDDRDDVVAKMIRQRKYLQGKFGG 115


>ref|XP_003608060.1| Something about silencing protein [Medicago truncatula]
           gi|355509115|gb|AES90257.1| Something about silencing
           protein [Medicago truncatula]
          Length = 653

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = +3

Query: 105 MGKSKG--RSHQKKDVIKNAKTSSRYQRDAFESDDMDDEIDAFHKQRDIVPLDVNGDAGE 278
           M K  G  +S+QKK   K+A T+SR  R  F ++DMDDEID FHKQRDIVPLD+N D+ E
Sbjct: 1   MAKKGGGSKSYQKK---KDATTTSRRDRYNFSAEDMDDEIDIFHKQRDIVPLDINADSAE 57

Query: 279 SDEDDELPVF 308
           SDEDDE+P+F
Sbjct: 58  SDEDDEMPIF 67


>ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325896|gb|EFH56316.1| Sas10/U3
           ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/101 (47%), Positives = 56/101 (55%)
 Frame = +3

Query: 132 QKKDVIKNAKTSSRYQRDAFESDDMDDEIDAFHKQRDIVPLDVNGDAGESDEDDELPVFX 311
           +K   +K +  S++ ++D  E D  DDEIDAFHKQRDIVPLDVN D  ESDEDD  PVF 
Sbjct: 3   KKGGTLKRSSKSTKNRKDIVE-DQYDDEIDAFHKQRDIVPLDVNDDTDESDEDDVQPVFD 61

Query: 312 XXXXXXXXXXXXXXXXXXXXXXXXXVAKMIRQGKHLRAKFG 434
                                     AKMIRQ K+LRAKFG
Sbjct: 62  LKGVDDESDEDEEDTEDEEESENGLTAKMIRQKKYLRAKFG 102


>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 57/113 (50%), Positives = 67/113 (59%)
 Frame = +3

Query: 99  SRMGKSKGRSHQKKDVIKNAKTSSRYQRDAFESDDMDDEIDAFHKQRDIVPLDVNGDAGE 278
           S MGK +GRS QKKD  +N K  +R  +D    +DMDDEIDAFHKQRD++PLD+NGDAGE
Sbjct: 49  SVMGK-RGRS-QKKDN-RNPKRRTR-DKDVLP-EDMDDEIDAFHKQRDVIPLDMNGDAGE 103

Query: 279 SDEDDELPVFXXXXXXXXXXXXXXXXXXXXXXXXXXVAKMIRQGKHLRAKFGG 437
           SDED+E PVF                           AK+ RQ K LRAK GG
Sbjct: 104 SDEDNEQPVF--DVENFSDDEDEDDDVDDDTQLTGLAAKIARQQKFLRAKIGG 154


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