BLASTX nr result

ID: Glycyrrhiza23_contig00023541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023541
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containin...   437   e-120
ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containin...   436   e-120
ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [...   424   e-116
ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   278   2e-72
ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin...   278   3e-72

>ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
            [Glycine max]
          Length = 646

 Score =  437 bits (1125), Expect = e-120
 Identities = 234/338 (69%), Positives = 253/338 (74%), Gaps = 7/338 (2%)
 Frame = +2

Query: 8    RLERNEFLAMISGEKPNNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKR 187
            R ERN+FLA ISGEKPN SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKR
Sbjct: 315  RPERNDFLAAISGEKPN-SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKR 373

Query: 188  MFGFVTFVYPETVRLILAKGNPHFICDSRVLVKPYKEKGKIPDKRXXXXXXXLERGDFSP 367
            MFGFVTFVYPETVRLIL+KGNPHFICDSRVLVKPYKEKGK+PDKR       LERGD SP
Sbjct: 374  MFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQQQQQQLERGDLSP 433

Query: 368  CLSPSGFDSKEPYDFHLGARMLYNPNDILLRRKXXXXXXXXXXXXXXXXXXKNLQLPDFK 547
            CLSPSGF SKEPYDFHLGARMLYNP+DILLRRK                  KNLQLPDFK
Sbjct: 434  CLSPSGFGSKEPYDFHLGARMLYNPHDILLRRKIEEQAELQQVLELQERRLKNLQLPDFK 493

Query: 548  NNPIHHHQRSFSVGAPLALPRQLHSHISNPGLSSDTTKGDVTGYIG-------IGTASEX 706
            NNPIHHHQRS SVG PL LP QLHSHI++ GLS D+ KGD+TGY G       +G ASE 
Sbjct: 494  NNPIHHHQRSLSVGTPLVLPHQLHSHINDAGLSPDSIKGDITGYSGSFTSTNSLGIASE- 552

Query: 707  XXXXXXXXKGVEPARVDDAESGNIKENAKAEVIDHSNSVEHDLPDSLFASPTKAAGDYLS 886
                    K V+PA +DD+ES N+ E+  AE +D SNSV   LPDSLFASPTKAAG Y +
Sbjct: 553  --QQQQLQKEVDPAHIDDSESRNLMESGNAEGVDLSNSVGQALPDSLFASPTKAAGGYHA 610

Query: 887  DFSPLEEVNEXXXXXXXXXXXHNKSESTTTASGDVASH 1000
            DFS L EVNE            +K E TT++S DVASH
Sbjct: 611  DFSTLAEVNE-SAVFSASSSSQDKLEPTTSSS-DVASH 646


>ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
            [Glycine max]
          Length = 658

 Score =  436 bits (1120), Expect = e-120
 Identities = 230/336 (68%), Positives = 254/336 (75%), Gaps = 7/336 (2%)
 Frame = +2

Query: 14   ERNEFLAMISGEKPNNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF 193
            ERN+FLA IS EK +NSAS+QIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF
Sbjct: 330  ERNDFLAAISSEK-SNSASQQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF 388

Query: 194  GFVTFVYPETVRLILAKGNPHFICDSRVLVKPYKEKGKIPDKRXXXXXXXLERGDFSPCL 373
            GFVTFVYPETVRLIL+KGNPHFICDSRVLVKPYKEKGK+PDKR       LERGD SPCL
Sbjct: 389  GFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQHQQQQLERGDLSPCL 448

Query: 374  SPSGFDSKEPYDFHLGARMLYNPNDILLRRKXXXXXXXXXXXXXXXXXXKNLQLPDFKNN 553
            SPSGF SKEPYDFHLGARMLYNP+D+LLRRK                  KNLQLPDFKNN
Sbjct: 449  SPSGFGSKEPYDFHLGARMLYNPHDVLLRRKIEEQAELQQVRELQERRLKNLQLPDFKNN 508

Query: 554  PIHHHQRSFSVGAPLALPRQLHSHISNPGLSSDTTKGDVTGYIG-------IGTASEXXX 712
            PIHHHQRS SVG PLALP QLHSHI++ GLS D+ KGD+TGY G       +G AS+   
Sbjct: 509  PIHHHQRSLSVGIPLALPHQLHSHINDAGLSPDSIKGDITGYSGSFSSTNSLGIASD--- 565

Query: 713  XXXXXXKGVEPARVDDAESGNIKENAKAEVIDHSNSVEHDLPDSLFASPTKAAGDYLSDF 892
                  K V+PA +DD+E+GN+KE+   E +D SNSVE  LPDSLFASPTKA GDY +DF
Sbjct: 566  -QQLPLKEVDPACIDDSENGNLKESGNTEGVDLSNSVEQALPDSLFASPTKATGDYHADF 624

Query: 893  SPLEEVNEXXXXXXXXXXXHNKSESTTTASGDVASH 1000
            S L EVNE            +K E TT++S DVASH
Sbjct: 625  STLAEVNE-SAVFSASSSSEDKLEPTTSSS-DVASH 658


>ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355512291|gb|AES93914.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 685

 Score =  424 bits (1091), Expect = e-116
 Identities = 226/337 (67%), Positives = 246/337 (72%), Gaps = 9/337 (2%)
 Frame = +2

Query: 5    GRLERNEFLAMISGEKPNNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQK 184
            GR ERNEFLAM+SG+KPN SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQK
Sbjct: 348  GRPERNEFLAMVSGDKPN-SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQK 406

Query: 185  RMFGFVTFVYPETVRLILAKGNPHFICDSRVLVKPYKEKGKIPDKRXXXXXXXLERGDFS 364
            RMFGFVTFV+PETVR+IL+KGNPHFICDSRVLVKPYKEKGK+PDKR        ERGDFS
Sbjct: 407  RMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGDFS 466

Query: 365  PCLSPSGFDSKEPYDFHLGARMLYNPNDILLRRK-XXXXXXXXXXXXXXXXXXKNLQLPD 541
            PCLSPS FDSKEP+DFH G RMLYNP+DILLRRK                   K+LQLPD
Sbjct: 467  PCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQAADFQQVLELQERRLKSLQLPD 526

Query: 542  FKNNPIHHHQRSFSVGAPLALPRQLHSHISNPGLSSDTTKGDVTGYIG-------IGTAS 700
            FKNNPIHHHQRS SVGAPL  P QLHSH+++ GLS D  +GD TGY G       +G AS
Sbjct: 527  FKNNPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSGSLTSAGSLGAAS 586

Query: 701  EXXXXXXXXXKGVEPARVDDAESGNIKENAKAEVID-HSNSVEHDLPDSLFASPTKAAGD 877
            E              A    AESGN+K+ AK+E +D    +VEH LPDSLFASPTKAAGD
Sbjct: 587  EQQELHKEADPSCIDAVTAAAESGNLKDVAKSEGVDLGKRNVEHTLPDSLFASPTKAAGD 646

Query: 878  YLSDFSPLEEVNEXXXXXXXXXXXHNKSESTTTASGD 988
            YLSDFSP EE NE             K ESTT+ASGD
Sbjct: 647  YLSDFSPQEEANE---STAFSTTLSQKFESTTSASGD 680


>ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 46-like [Cucumis sativus]
          Length = 675

 Score =  278 bits (712), Expect = 2e-72
 Identities = 161/337 (47%), Positives = 208/337 (61%), Gaps = 7/337 (2%)
 Frame = +2

Query: 8    RLERNEFLAMISGEKPNNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKR 187
            R ERN+FLA+ + ++  NSASRQIYLTFPA+STFKDEDVSEYFSKFGPVQDVRIPYQQKR
Sbjct: 346  RSERNDFLALAAEKR--NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKR 403

Query: 188  MFGFVTFVYPETVRLILAKGNPHFICDSRVLVKPYKEKGKIPDKRXXXXXXXLERGDFSP 367
            MFGFVTFVYPETV+ ILAKGNPHFIC+SRVLVKPYKEKGK+P+KR       L+RGDFSP
Sbjct: 404  MFGFVTFVYPETVKXILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSP 463

Query: 368  CLSPSGFDSKEPYDFHLGARMLY-NPNDILLRRKXXXXXXXXXXXXXXXXXXKNLQLPDF 544
            CLSPSG D+++PYD +LGARM+Y N   ++LRRK                   NLQLPD 
Sbjct: 464  CLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDL 523

Query: 545  KNNPIHHHQ-RSFSVGAPLALP--RQLHSHISNPG-LSSDTTKGDVTGYIGIGTASEXXX 712
            KN+ +HHH   +  + APL++    Q++ +I  P  ++ + ++G     +    A     
Sbjct: 524  KNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQ 583

Query: 713  XXXXXXKGVEPARVDDAESGN--IKENAKAEVIDHSNSVEHDLPDSLFASPTKAAGDYLS 886
                     E      + SG    ++   +E+++   SVE  LPDS FASP K+A    S
Sbjct: 584  NFQLE----ENLCFIQSNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHS 639

Query: 887  DFSPLEEVNEXXXXXXXXXXXHNKSESTTTASGDVAS 997
            D S ++   +            +     T  +GD+AS
Sbjct: 640  DISSVK--GDGCGPNTLPSSSQSNPSLPTGPAGDIAS 674


>ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
            [Cucumis sativus]
          Length = 675

 Score =  278 bits (710), Expect = 3e-72
 Identities = 161/337 (47%), Positives = 208/337 (61%), Gaps = 7/337 (2%)
 Frame = +2

Query: 8    RLERNEFLAMISGEKPNNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKR 187
            R ERN+FLA+ + ++  NSASRQIYLTFPA+STFKDEDVSEYFSKFGPVQDVRIPYQQKR
Sbjct: 346  RSERNDFLALAAEKR--NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKR 403

Query: 188  MFGFVTFVYPETVRLILAKGNPHFICDSRVLVKPYKEKGKIPDKRXXXXXXXLERGDFSP 367
            MFGFVTFVYPETV+ ILAKGNPHFIC+SRVLVKPYKEKGK+P+KR       L+RGDFSP
Sbjct: 404  MFGFVTFVYPETVKNILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSP 463

Query: 368  CLSPSGFDSKEPYDFHLGARMLY-NPNDILLRRKXXXXXXXXXXXXXXXXXXKNLQLPDF 544
            CLSPSG D+++PYD +LGARM+Y N   ++LRRK                   NLQLPD 
Sbjct: 464  CLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDL 523

Query: 545  KNNPIHHHQ-RSFSVGAPLALP--RQLHSHISNPG-LSSDTTKGDVTGYIGIGTASEXXX 712
            KN+ +HHH   +  + APL++    Q++ +I  P  ++ + ++G     +    A     
Sbjct: 524  KNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQ 583

Query: 713  XXXXXXKGVEPARVDDAESGN--IKENAKAEVIDHSNSVEHDLPDSLFASPTKAAGDYLS 886
                     E      + SG    ++   +E+++   SVE  LPDS FASP K+A    S
Sbjct: 584  NFQLE----ENLCFIQSNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHS 639

Query: 887  DFSPLEEVNEXXXXXXXXXXXHNKSESTTTASGDVAS 997
            D S ++   +            +     T  +GD+AS
Sbjct: 640  DISSVK--GDGCGPNTLPSSSQSNPSLPTGPAGDIAS 674


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