BLASTX nr result

ID: Glycyrrhiza23_contig00023534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023534
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523332.1| DNA binding protein, putative [Ricinus commu...    59   5e-07
ref|XP_003528790.1| PREDICTED: transcription factor bHLH13-like ...    58   7e-07
ref|XP_003553791.1| PREDICTED: transcription factor bHLH13-like ...    58   9e-07
ref|XP_003520875.1| PREDICTED: transcription factor bHLH13-like ...    56   3e-06
ref|XP_002302637.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002523332.1| DNA binding protein, putative [Ricinus communis]
           gi|223537420|gb|EEF39048.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 615

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = -2

Query: 252 LHGSSWGVRHP---NSPAEVFAARSSSMGHVSEVATNGVRHDLRLNNNYCPSQRQVQMQI 82
           LHGSSW         +PAEV+ +++++  ++ E+  NGVR D RL N   P Q+QVQMQI
Sbjct: 337 LHGSSWAHSFSLKQGTPAEVYGSQATT-NNLQELV-NGVREDYRLKNY--PPQKQVQMQI 392

Query: 81  DFSGATSRPSVRVRPVNIAESE 16
           DFSG    PSV  RPVN+ ESE
Sbjct: 393 DFSG----PSVIGRPVNV-ESE 409


>ref|XP_003528790.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
          Length = 626

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
 Frame = -2

Query: 252 LHGSSWG----VRHPNSPAEVFAARSSSMGHVSEVATNGVRHDLRLNNNYCPSQRQVQMQ 85
           + GSSWG    VRH   P E+ A R +S G + ++A NG RHD  ++NN+   QR VQMQ
Sbjct: 347 VQGSSWGAGQVVRHLGPP-EMLAPRLASSGTLPKLA-NGARHDF-VHNNF-EQQRPVQMQ 402

Query: 84  IDFSGATSRPSVRVRPVNIAESELA 10
           IDFSGATSR +   R + IAESE++
Sbjct: 403 IDFSGATSR-AASGRSI-IAESEIS 425


>ref|XP_003553791.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
          Length = 619

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 46/114 (40%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = -2

Query: 339 RPWRGGLXXXXXXXXXXXXXXXXXXGGGLLHGSSWGV----RHPNSPAEVFAARSSSMGH 172
           RPW G                     G  LH SSW V    R P  P E+FA R+ +   
Sbjct: 299 RPWPGHGHPDPNGNNLHNNVSFPNVRGNSLHVSSWAVNSDLRQPG-PLEIFAPRAPTSSV 357

Query: 171 VSEVATNGVRHDLRLNNNYCPSQRQVQMQIDFSGATSRPSVRVRPVNIAESELA 10
           ++E+A  G + D R        QRQVQMQIDF+GATSRPS   RPV + E EL+
Sbjct: 358 LAELANVG-KQDFR-------PQRQVQMQIDFTGATSRPS-SARPV-VGELELS 401


>ref|XP_003520875.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
          Length = 550

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 171 VSEVATNGVRHDLRLNNNYCPSQRQVQMQIDFSGATSRPS 52
           V+E+A NGVR DLRL+N+Y P QRQVQMQIDFSG TSRPS
Sbjct: 317 VAELA-NGVRQDLRLSNSYEP-QRQVQMQIDFSGGTSRPS 354


>ref|XP_002302637.1| predicted protein [Populus trichocarpa] gi|222844363|gb|EEE81910.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -2

Query: 252 LHGSSW----GVRHPNSPAEVFAARSSSMGHVSEVATNGVRHDLRLNNNYCPSQRQVQMQ 85
           LHGSSW    G++   +P EV+ +++++  ++ E+  NGVR + R  +N+   Q+QVQ+Q
Sbjct: 262 LHGSSWAQSFGLKQ-GTPGEVYGSQATA-NNLKELV-NGVREEFR--HNHYQGQKQVQVQ 316

Query: 84  IDFSGATSRPSVRVRPVNIAESE 16
           IDFSGATS PS   RP+  AESE
Sbjct: 317 IDFSGATSGPSGIGRPLG-AESE 338


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