BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023525
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588753.1| Pentatricopeptide repeat-containing protein ...   142   2e-32
ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002515531.1| pentatricopeptide repeat-containing protein,...   120   2e-25
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23

>ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477801|gb|AES59004.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/114 (65%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = -2

Query: 341 NTTTSRVAEQTCLSLLHS-CNTFPHLTQIHAFILKLGLQNNPLVLTKFASTSSNVNAIHY 165
           NT  +R+ EQT L+LL+S CNT   LTQIHAFILK GLQNNPL+LTKF STSSN+N+IHY
Sbjct: 9   NTPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHY 68

Query: 164 ASSFLFPSYQNAPNNNNPSSYDAFLFNTVIRAYAQTCDSKFKALQLYRTMLRYG 3
           A+SFLFP   +   +    SYDAFLFNT+IRAY+QT DSK  +   YRTMLRYG
Sbjct: 69  ATSFLFP--PSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYG 120


>ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/113 (63%), Positives = 86/113 (76%)
 Frame = -2

Query: 344 PNTTTSRVAEQTCLSLLHSCNTFPHLTQIHAFILKLGLQNNPLVLTKFASTSSNVNAIHY 165
           P+TT  RVAEQT LSLL +C+T    TQIH+ ILKLGL +NPLVLTKFA+TSS+ NA+HY
Sbjct: 113 PHTTKRRVAEQTILSLLTTCDTLTTFTQIHSLILKLGLHHNPLVLTKFAATSSHFNAVHY 172

Query: 164 ASSFLFPSYQNAPNNNNPSSYDAFLFNTVIRAYAQTCDSKFKALQLYRTMLRY 6
           ASS LFP+ Q  P    P S+DAFLFNT+IRA+AQT  SK  AL+ Y TM R+
Sbjct: 173 ASSVLFPNDQTTP----PPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRH 221


>ref|XP_002515531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545475|gb|EEF46980.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = -2

Query: 335 TTSRVAEQTCLSLLHSCNTFPHLTQIHAFILKLGLQNNPLVLTKFASTSSNVNAIHYASS 156
           +  R AEQ CLSLL  CNTF  LTQIH  ILKLGL NNPLVLTK+ STSSN++AI YASS
Sbjct: 26  SNKREAEQRCLSLLQDCNTFSKLTQIHTQILKLGLSNNPLVLTKYTSTSSNLHAIDYASS 85

Query: 155 FLFPSYQNAPNNNNPSSYDAFLFNTVIRAYAQTCD-SKFKALQLYRTMLRY 6
           F+F         ++   YD FLFNT+IRAYA + + SK KAL +Y+ ML Y
Sbjct: 86  FIFSP------ESDKRLYDTFLFNTIIRAYAHSNNVSKGKALCMYKLMLEY 130


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|449529652|ref|XP_004171812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  119 bits (299), Expect = 2e-25
 Identities = 66/110 (60%), Positives = 75/110 (68%)
 Frame = -2

Query: 341 NTTTSRVAEQTCLSLLHSCNTFPHLTQIHAFILKLGLQNNPLVLTKFASTSSNVNAIHYA 162
           +T   R  EQ CL+LL +CN  P LTQIH  ILKLGL NNPLVLTKFAS SS ++A  YA
Sbjct: 21  STPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYA 80

Query: 161 SSFLFPSYQNAPNNNNPSSYDAFLFNTVIRAYAQTCDSKFKALQLYRTML 12
           +SFLF +        +   YDAFLFNT+IRAYAQT  SK KAL LY  ML
Sbjct: 81  ASFLFSA------EADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIML 124


>ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
           gi|296082021|emb|CBI21026.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/108 (54%), Positives = 73/108 (67%)
 Frame = -2

Query: 326 RVAEQTCLSLLHSCNTFPHLTQIHAFILKLGLQNNPLVLTKFASTSSNVNAIHYASSFLF 147
           R  EQ CL +L +CNT P L Q+H  I+KLG QNNPLVLTKF S SSN++AI YA S +F
Sbjct: 4   RAVEQPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVF 63

Query: 146 PSYQNAPNNNNPSSYDAFLFNTVIRAYAQTCDSKFKALQLYRTMLRYG 3
            S ++A        YDAFLF+T+IRAYA++  SK  A+  Y  ML YG
Sbjct: 64  -SVEDA------RVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYG 104