BLASTX nr result

ID: Glycyrrhiza23_contig00023474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023474
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605368.1| RING finger family protein [Medicago truncat...   265   1e-68
ref|XP_003534697.1| PREDICTED: RING-H2 finger protein ATL7-like ...   235   1e-59
ref|XP_002521749.1| protein with unknown function [Ricinus commu...   187   3e-45
ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ...   182   9e-44
ref|NP_192753.1| RING-H2 finger protein ATL7 [Arabidopsis thalia...   164   2e-38

>ref|XP_003605368.1| RING finger family protein [Medicago truncatula]
           gi|355506423|gb|AES87565.1| RING finger family protein
           [Medicago truncatula]
          Length = 226

 Score =  265 bits (678), Expect = 1e-68
 Identities = 149/222 (67%), Positives = 161/222 (72%), Gaps = 8/222 (3%)
 Frame = -2

Query: 950 CCRSESS------NASAELKLYRAFIFSVPXXXXXXXXXXXXXXXLRPRRVDWSSLRMRP 789
           CC S SS      +  AELKLYRAFIFSVP               LRPRRVDWSS+RMR 
Sbjct: 7   CCSSSSSGNRSDASGVAELKLYRAFIFSVPIFFTLILLFLFYVFYLRPRRVDWSSIRMRS 66

Query: 788 FP--DXXXXNIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQ 615
                    N AT STS LGLKKELREMLPI+VY ESFSVKDTQCSVCLLDYQ EDRLQQ
Sbjct: 67  VSVLQHHHNNNAT-STSDLGLKKELREMLPIIVYNESFSVKDTQCSVCLLDYQPEDRLQQ 125

Query: 614 IPACGHTFHMGCIDLWLASHSTCPLCRLSLLTTAKSSTETQNMQRSLSNEETHRPQSNEE 435
           IPACGHTFHM CIDLWL+SHSTCPLCRLSLL TAKSSTE   MQ + SNEE    QS+EE
Sbjct: 126 IPACGHTFHMSCIDLWLSSHSTCPLCRLSLLPTAKSSTEISEMQ-ATSNEEMEMQQSDEE 184

Query: 434 TQTMEFSDSTSTRHLETTVIQNVSGEVAIGTNQ*EHEDMRDY 309
           T  MEFSDS STRHLET+VIQNVSGE AI  ++ E E+  ++
Sbjct: 185 TLAMEFSDSRSTRHLETSVIQNVSGEAAIDDHRIEVEERNNH 226


>ref|XP_003534697.1| PREDICTED: RING-H2 finger protein ATL7-like [Glycine max]
          Length = 219

 Score =  235 bits (599), Expect = 1e-59
 Identities = 132/207 (63%), Positives = 145/207 (70%), Gaps = 4/207 (1%)
 Frame = -2

Query: 947 CRSESSN---ASAELKLYRAFIFSVPXXXXXXXXXXXXXXXLRPR-RVDWSSLRMRPFPD 780
           C S SS+   AS ELKLYRAFIF VP               LRPR R+ W S    P  +
Sbjct: 15  CWSSSSSRSVASTELKLYRAFIFCVPIFFTLILLFLFYLFYLRPRTRLHWISHFRLPSNN 74

Query: 779 XXXXNIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACG 600
                I+T+   GLGL KELREMLPI+VYKESFSVKDTQCSVCLLDYQAEDRLQQIPACG
Sbjct: 75  NRNNAISTL---GLGLNKELREMLPIIVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACG 131

Query: 599 HTFHMGCIDLWLASHSTCPLCRLSLLTTAKSSTETQNMQRSLSNEETHRPQSNEETQTME 420
           HTFHM CIDLWLA+H+TCPLCR SLLTTAKSST+  +M            Q+NEETQ ME
Sbjct: 132 HTFHMSCIDLWLATHTTCPLCRFSLLTTAKSSTQASDM------------QNNEETQAME 179

Query: 419 FSDSTSTRHLETTVIQNVSGEVAIGTN 339
           FS+STS R LET V QNVSGEVAI T+
Sbjct: 180 FSESTSPRDLETNVFQNVSGEVAISTH 206


>ref|XP_002521749.1| protein with unknown function [Ricinus communis]
           gi|223538962|gb|EEF40559.1| protein with unknown
           function [Ricinus communis]
          Length = 337

 Score =  187 bits (476), Expect = 3e-45
 Identities = 103/165 (62%), Positives = 112/165 (67%), Gaps = 3/165 (1%)
 Frame = -2

Query: 950 CCR---SESSNASAELKLYRAFIFSVPXXXXXXXXXXXXXXXLRPRRVDWSSLRMRPFPD 780
           CC    S SS AS ELKLY+AFIFSVP               LR RRVDW+SLRMR    
Sbjct: 11  CCSEPSSSSSVASTELKLYQAFIFSVPIFFTFVLLFLFYLFYLRRRRVDWASLRMRA--- 67

Query: 779 XXXXNIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACG 600
                   I  + LGLKKE+REMLPI+VYKESFSVKDTQC VCL DYQAEDRLQQIPACG
Sbjct: 68  -NLQGSDNIFRAELGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACG 126

Query: 599 HTFHMGCIDLWLASHSTCPLCRLSLLTTAKSSTETQNMQRSLSNE 465
           HTFHM CID WLA+H+TCPLCRLSL+  AK  TE+ N Q     E
Sbjct: 127 HTFHMVCIDHWLANHTTCPLCRLSLVAPAKVPTESPNNQVEAGQE 171


>ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera]
           gi|297734760|emb|CBI16994.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  182 bits (463), Expect = 9e-44
 Identities = 101/174 (58%), Positives = 116/174 (66%)
 Frame = -2

Query: 950 CCRSESSNASAELKLYRAFIFSVPXXXXXXXXXXXXXXXLRPRRVDWSSLRMRPFPDXXX 771
           CC     +ASAELKLY+AFIFSVP               LR RRVDW+SLRMR       
Sbjct: 11  CC-----SASAELKLYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWASLRMRSSMQNDA 65

Query: 770 XNIATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTF 591
            + + +S   LGLKKE+REMLPI+V+KESFSV DTQCSVCL DYQAEDRLQQIPACGHTF
Sbjct: 66  DHASGVSE--LGLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQIPACGHTF 123

Query: 590 HMGCIDLWLASHSTCPLCRLSLLTTAKSSTETQNMQRSLSNEETHRPQSNEETQ 429
           HM CID WLA+H+TCPLCRLSL   A++  E   +       ET    S E+TQ
Sbjct: 124 HMDCIDHWLATHTTCPLCRLSLTAAARTPAEPLTIL-----VETPHGTSPEQTQ 172


>ref|NP_192753.1| RING-H2 finger protein ATL7 [Arabidopsis thaliana]
           gi|68565338|sp|Q9SN28.1|ATL7_ARATH RecName: Full=RING-H2
           finger protein ATL7 gi|4538979|emb|CAB39767.1| putative
           protein [Arabidopsis thaliana]
           gi|7267711|emb|CAB78138.1| putative protein [Arabidopsis
           thaliana] gi|21689651|gb|AAM67447.1| unknown protein
           [Arabidopsis thaliana] gi|332657448|gb|AEE82848.1|
           RING-H2 finger protein ATL7 [Arabidopsis thaliana]
          Length = 236

 Score =  164 bits (416), Expect = 2e-38
 Identities = 96/202 (47%), Positives = 123/202 (60%), Gaps = 9/202 (4%)
 Frame = -2

Query: 935 SSNASAELKLYRAFIFSVPXXXXXXXXXXXXXXXLRPR---RVDWSSLRMRPFPDXXXXN 765
           +S  S +LKLY+AFIFSVP               LR      VDWSSL MR         
Sbjct: 19  NSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRG--GTFVPT 76

Query: 764 IATISTSGLGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTFHM 585
              +ST+ LGL K++REMLP+V+YKESF VKD+QCSVCL DYQAE++LQQ+P+CGHTFHM
Sbjct: 77  NNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 136

Query: 584 GCIDLWLASHSTCPLCRLSL-----LTTAKSSTE-TQNMQRSLSNEETHRPQSNEETQTM 423
            CIDLWL SH+TCPLCRLSL     L  +  STE   +++ S   E + +P S   T+ +
Sbjct: 137 ECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAI 196

Query: 422 EFSDSTSTRHLETTVIQNVSGE 357
             +D     + ++   Q VS E
Sbjct: 197 SHTDDVEEGNRDS---QEVSKE 215


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