BLASTX nr result

ID: Glycyrrhiza23_contig00023439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023439
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...   145   1e-32
ref|XP_003536441.1| PREDICTED: uncharacterized protein LOC100819...   105   1e-20
ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine...    89   6e-16
ref|XP_003536442.1| PREDICTED: uncharacterized protein LOC100819...    72   1e-10
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...    57   5e-06

>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
            gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
            factor [Medicago truncatula]
          Length = 1335

 Score =  145 bits (365), Expect = 1e-32
 Identities = 81/130 (62%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1    IERKKVENSKVSSKQLDEQIGGDKLSIDDSDDETLXXXXXXXXXXXXXXXEQLHEHANED 180
            I +KKV+N K S KQL EQ G DKLS DD D+E L               + LHE  NED
Sbjct: 1207 ILKKKVKNRKESRKQLQEQTGEDKLSKDDLDEEILGSILKKKRNGSVSS-DYLHESTNED 1265

Query: 181  KLSRDDSDDEMLRSALNENQG-FMNSHQVEYQQVDPELVDSDDEVAVNAFPHNAVSRRKL 357
            +LSRDDS+DEML+SA NENQG F+NSHQVE  QVDP+L DS+DEVAV+  P NAVSRRKL
Sbjct: 1266 ELSRDDSEDEMLQSAPNENQGGFVNSHQVENMQVDPDLEDSEDEVAVDTLPDNAVSRRKL 1325

Query: 358  RMVIDPEDDD 387
            RMV+D EDDD
Sbjct: 1326 RMVVDLEDDD 1335



 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    IERKKVENSKVSSKQLDEQIGGDKLSIDDSDDETLXXXXXXXXXXXXXXXEQLHEHANED 180
            ++RKK +N K SS+QL EQ   DKLS DDSDDE L               EQL E   ED
Sbjct: 1133 VKRKKGKNRKESSEQLREQTNEDKLSKDDSDDEMLASILKKKGKNRNISSEQLQEQTGED 1192

Query: 181  KLSRDDSDDEMLRSALNEN-QGFMNSHQVEYQQVDPELVDSDD 306
            KLS+DDSDDE+L S L +  +    S +   +Q   + +  DD
Sbjct: 1193 KLSKDDSDDEILGSILKKKVKNRKESRKQLQEQTGEDKLSKDD 1235


>ref|XP_003536441.1| PREDICTED: uncharacterized protein LOC100819261 [Glycine max]
          Length = 162

 Score =  105 bits (261), Expect = 1e-20
 Identities = 74/164 (45%), Positives = 85/164 (51%), Gaps = 40/164 (24%)
 Frame = +1

Query: 16  VENSKVSSKQLDEQIGGDKLSIDDSDDETLXXXXXXXXXXXXXXXEQLHEHANEDKLSRD 195
           +EN K+S  QL  QI  D+LSIDDSDDE L               EQL E  N D LSRD
Sbjct: 1   MENDKLSRGQLHGQISEDRLSIDDSDDEMLSSVLKEKINSKVST-EQLLEPINVDALSRD 59

Query: 196 DSDDEMLRSALNE----------------------------NQG------------FMNS 255
           DSDDEM  SAL                              N+G             MNS
Sbjct: 60  DSDDEMPSSALKRTRRSSLNSKQVELENIQIQERIMGDDSFNEGKTDALERDNRVDSMNS 119

Query: 256 HQVEYQQVDPELVDSDDEVAVNAFPHNAVSRRKLRMVIDPEDDD 387
            Q+E+QQ+D +L DS+DEVAV+ FP NA SRR+LRMVIDPEDDD
Sbjct: 120 SQIEHQQMD-DLADSEDEVAVSGFPDNARSRRQLRMVIDPEDDD 162


>ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine max]
          Length = 1171

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 63/144 (43%), Positives = 71/144 (49%), Gaps = 41/144 (28%)
 Frame = +1

Query: 79   IDDSDDETLXXXXXXXXXXXXXXXE-QLHEHANEDKLSRDDSDDEMLRSALNE------- 234
            +D+SDDETL                 QLH   +EDKLS+DDSDDEML S L         
Sbjct: 1029 MDESDDETLVSLVKRKKMESDKLSRGQLHGQTSEDKLSKDDSDDEMLSSVLKRTRRPSLK 1088

Query: 235  ---------------------NQGF------------MNSHQVEYQQVDPELVDSDDEVA 315
                                 N G             MNS QVEYQQ+D +L D +DEVA
Sbjct: 1089 SKQVELENIQIHERIMGDDSFNGGITEVSEGEYRVDSMNSSQVEYQQMD-DLADLEDEVA 1147

Query: 316  VNAFPHNAVSRRKLRMVIDPEDDD 387
            V+A P NA SRRKLRMVIDPEDDD
Sbjct: 1148 VSAVPDNARSRRKLRMVIDPEDDD 1171


>ref|XP_003536442.1| PREDICTED: uncharacterized protein LOC100819799 [Glycine max]
          Length = 68

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
 Frame = +1

Query: 193 DDSDDEMLRSALNENQGF--MNSHQVEYQQVDPELVDSDDEVAVNAFPHNAVSRRKLRMV 366
           DDS +E     L  +     MNS Q+E+QQ+D +L DS+DEVAV+AFP NA SRR+LRMV
Sbjct: 3   DDSFNEGKTDVLERDNRVDSMNSSQIEHQQMD-DLADSEDEVAVSAFPDNARSRRQLRMV 61

Query: 367 IDPEDDD 387
           IDPEDDD
Sbjct: 62  IDPEDDD 68


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = +1

Query: 193  DDSDDEMLRSALNENQGFMNSHQVE---YQQVDPELVDSDDEVAVNAFPHNAVSRRKLRM 363
            D+S+DE++  +  +  G  +++  +   +QQV  EL DS D++A +A P N+ SRRKLRM
Sbjct: 1202 DNSEDEIMAFSSEKQLGAASANNRDISPHQQVADELADSGDDIASSALPINSTSRRKLRM 1261

Query: 364  VIDPEDDD 387
            VID EDD+
Sbjct: 1262 VIDFEDDE 1269


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