BLASTX nr result

ID: Glycyrrhiza23_contig00023419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023419
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L4...   439   e-121
gb|AFK37616.1| unknown [Lotus japonicus]                              438   e-121
ref|XP_003591058.1| 39S ribosomal protein L45 [Medicago truncatu...   362   6e-98
ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211...   350   4e-94
ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L4...   347   2e-93

>ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Glycine max]
          Length = 309

 Score =  439 bits (1129), Expect = e-121
 Identities = 219/266 (82%), Positives = 243/266 (91%), Gaps = 1/266 (0%)
 Frame = +3

Query: 3   GSEGNFKSFHPHLFKGHDGFPLASAKTLTLRSTMAAELSIFMNDKRMLSTQVKAPAQVRQ 182
           GSEGNF+SFH HL KG DGFP A  K+LTLRSTMAAELSIFMN++RMLSTQVKA AQ RQ
Sbjct: 41  GSEGNFRSFHSHLLKGQDGFPFAGVKSLTLRSTMAAELSIFMNNRRMLSTQVKASAQARQ 100

Query: 183 GGQLQIALLSPGFIFEPYEPREKIPFWKRWFTRSGWRRTKNDIIMEIRSAYAIQKLRKSG 362
            GQ QI+L SPGFI+EPYEPR+KIPFWKRWFTRSG RRTKNDII+E++SAYAI KLRK+G
Sbjct: 101 VGQ-QISLSSPGFIYEPYEPRDKIPFWKRWFTRSGLRRTKNDIILELKSAYAIAKLRKTG 159

Query: 363 YSKKKFYNEAANIYEEINTLIAKGDKKSLRKAVTEKMFSELKNEIKQRETVQSRVYWELV 542
           YSK +FYNEAAN+Y+EINTLIAKGDK++LRKAVTE MFS LKNEIKQRET  SRVYWE+V
Sbjct: 160 YSKNQFYNEAANMYKEINTLIAKGDKRTLRKAVTENMFSALKNEIKQRETAWSRVYWEMV 219

Query: 543 KP-VKIRTLRARMIGVDPKNLNKAFIQLTLEILAKQKFEAYDSKGSVIAGDKNKEVLVRD 719
           +P VKIRTLRAR+IGVD K+LNK FIQLTLEILAKQKFEAYDSKGSV+AGDK+KEVLVRD
Sbjct: 220 EPVVKIRTLRARLIGVDRKDLNKTFIQLTLEILAKQKFEAYDSKGSVVAGDKSKEVLVRD 279

Query: 720 IWVFEKSLFHPGAFWRLCGRITPKAS 797
           IWVFEKS+FH GA WRLCGRI+PKAS
Sbjct: 280 IWVFEKSMFHAGATWRLCGRISPKAS 305


>gb|AFK37616.1| unknown [Lotus japonicus]
          Length = 305

 Score =  438 bits (1127), Expect = e-121
 Identities = 212/266 (79%), Positives = 241/266 (90%), Gaps = 1/266 (0%)
 Frame = +3

Query: 3   GSEGNFKSFHPHLFKGHDGFPLASAKTLTLRSTMAAELSIFMNDKRMLSTQVKAPAQVRQ 182
           GSEGNFKSFH HLFK HDGFPLA  KTLTLRSTMAAELSIFMNDKRMLSTQ+K  +  R 
Sbjct: 41  GSEGNFKSFHSHLFKCHDGFPLAGGKTLTLRSTMAAELSIFMNDKRMLSTQLKGSSLSRA 100

Query: 183 GGQLQIALLSPGFIFEPYEPREKIPFWKRWFTRSGWRRTKNDIIMEIRSAYAIQKLRKSG 362
            G  QI++ SPGFI+EPYEPREKIPFW+RWFTRSGW+RTK D+I+E++SAYAIQKLRKSG
Sbjct: 101 VGT-QISVSSPGFIYEPYEPREKIPFWQRWFTRSGWKRTKQDVILELKSAYAIQKLRKSG 159

Query: 363 YSKKKFYNEAANIYEEINTLIAKGDKKSLRKAVTEKMFSELKNEIKQRETVQSRVYWELV 542
           YSK +FYNEA  +Y+EIN LIA GDKKSLRKAVTEKM+S LKNEIKQRET  ++VYWEL+
Sbjct: 160 YSKSRFYNEAFKMYKEINALIANGDKKSLRKAVTEKMYSALKNEIKQRETTWNKVYWELI 219

Query: 543 KPV-KIRTLRARMIGVDPKNLNKAFIQLTLEILAKQKFEAYDSKGSVIAGDKNKEVLVRD 719
           +PV ++RTLRAR+IGVDPK+LNK F+QLTLEI AKQKFEAYDSKGSV+AGDKNKEVLVRD
Sbjct: 220 EPVIRVRTLRARLIGVDPKDLNKVFVQLTLEITAKQKFEAYDSKGSVVAGDKNKEVLVRD 279

Query: 720 IWVFEKSLFHPGAFWRLCGRITPKAS 797
           IWVFEKS+FHPGA+WRLCGR++PKAS
Sbjct: 280 IWVFEKSMFHPGAYWRLCGRLSPKAS 305


>ref|XP_003591058.1| 39S ribosomal protein L45 [Medicago truncatula]
           gi|355480106|gb|AES61309.1| 39S ribosomal protein L45
           [Medicago truncatula] gi|388515325|gb|AFK45724.1|
           unknown [Medicago truncatula]
          Length = 294

 Score =  362 bits (930), Expect = 6e-98
 Identities = 184/256 (71%), Positives = 214/256 (83%), Gaps = 3/256 (1%)
 Frame = +3

Query: 39  LFKGHDGFPLASAKTLTLRSTMAAELSIFMNDKRMLSTQVKAP--AQVRQGGQLQIALLS 212
           LFK +DGF  A+ KTLT RSTMAAE SIFMND++M ++ VK    AQVR  G  QI L S
Sbjct: 40  LFKPNDGFSFANVKTLTFRSTMAAEFSIFMNDRKMSTSAVKVRPNAQVRPMGA-QICLSS 98

Query: 213 PGFIFEPYEPREKIPFWKRWFTRSGWRRTKNDIIMEIRSAYAIQKLRKSGYSKKKFYNEA 392
           PG I+EPYEPREKIPFWKR FTRSGW RTK+D++ME+++AY I +LRK+GYSKK+FY EA
Sbjct: 99  PGIIYEPYEPREKIPFWKRMFTRSGWERTKSDLMMEVKNAYTIARLRKTGYSKKQFYLEA 158

Query: 393 ANIYEEINTLIAKGDKKSLRKAVTEKMFSELKNEIKQRETVQSRVYWELVKP-VKIRTLR 569
            ++Y++INTLIA GDK SLRKAVTEKMFS LKNEIK RET  SRVYWE+V+P V IRTLR
Sbjct: 159 ISMYKQINTLIANGDKHSLRKAVTEKMFSTLKNEIKVRETTWSRVYWEMVEPVVLIRTLR 218

Query: 570 ARMIGVDPKNLNKAFIQLTLEILAKQKFEAYDSKGSVIAGDKNKEVLVRDIWVFEKSLFH 749
           ARM+GVD  + NK F Q+TLEILAKQKFEAYDSKGSV+AGDKNKEVLVRDIW+FEK  F 
Sbjct: 219 ARMLGVDKSDTNKVFYQITLEILAKQKFEAYDSKGSVVAGDKNKEVLVRDIWIFEKPSFL 278

Query: 750 PGAFWRLCGRITPKAS 797
           P ++WRLCGRI+PKAS
Sbjct: 279 PRSYWRLCGRISPKAS 294


>ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211143 [Cucumis sativus]
          Length = 302

 Score =  350 bits (897), Expect = 4e-94
 Identities = 172/251 (68%), Positives = 207/251 (82%), Gaps = 3/251 (1%)
 Frame = +3

Query: 39  LFKGHDGFPLASAKTLTLRSTMAAELSIFMNDK--RMLSTQVKAPAQVRQGGQLQIALLS 212
           L   H  F LA    + + S +AAE S+F +    R+++TQVKAP Q RQ   L++ +LS
Sbjct: 50  LSNSHSAFSLARGHKMIICSAVAAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLS 109

Query: 213 PGFIFEPYEPREKIPFWKRWFTRSGWRRTKNDIIMEIRSAYAIQKLRKSGYSKKKFYNEA 392
           PGFI+EPY PR+++PFW+RWFTRSGW+RTK+DII+E++SAYAI KLRK GYSKKKFY EA
Sbjct: 110 PGFIYEPYSPRQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEA 169

Query: 393 ANIYEEINTLIAKGDKKSLRKAVTEKMFSELKNEIKQRETVQSRVYWELVKP-VKIRTLR 569
           AN+Y EINTLIA GDK SLRKAVTE M+S LKNEIK RE+  S+VYWE++ P VKIRTLR
Sbjct: 170 ANLYREINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLR 229

Query: 570 ARMIGVDPKNLNKAFIQLTLEILAKQKFEAYDSKGSVIAGDKNKEVLVRDIWVFEKSLFH 749
           AR+IGVD  +L K F+QLTLEILAKQKFEAY+S+G+V+AGDK+KEVLVRDIWVFEKSLFH
Sbjct: 230 ARLIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFH 289

Query: 750 PGAFWRLCGRI 782
            GAFWRLCGRI
Sbjct: 290 EGAFWRLCGRI 300


>ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Cucumis sativus]
          Length = 302

 Score =  347 bits (891), Expect = 2e-93
 Identities = 171/251 (68%), Positives = 206/251 (82%), Gaps = 3/251 (1%)
 Frame = +3

Query: 39  LFKGHDGFPLASAKTLTLRSTMAAELSIFMNDK--RMLSTQVKAPAQVRQGGQLQIALLS 212
           L   H  F LA    + + S +AAE  +F +    R+++TQVKAP Q RQ   L++ +LS
Sbjct: 50  LSNSHSAFSLARGHKMIICSAVAAEFLVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLS 109

Query: 213 PGFIFEPYEPREKIPFWKRWFTRSGWRRTKNDIIMEIRSAYAIQKLRKSGYSKKKFYNEA 392
           PGFI+EPY PR+++PFW+RWFTRSGW+RTK+DII+E++SAYAI KLRK GYSKKKFY EA
Sbjct: 110 PGFIYEPYSPRQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEA 169

Query: 393 ANIYEEINTLIAKGDKKSLRKAVTEKMFSELKNEIKQRETVQSRVYWELVKP-VKIRTLR 569
           AN+Y EINTLIA GDK SLRKAVTE M+S LKNEIK RE+  S+VYWE++ P VKIRTLR
Sbjct: 170 ANLYREINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLR 229

Query: 570 ARMIGVDPKNLNKAFIQLTLEILAKQKFEAYDSKGSVIAGDKNKEVLVRDIWVFEKSLFH 749
           AR+IGVD  +L K F+QLTLEILAKQKFEAY+S+G+V+AGDK+KEVLVRDIWVFEKSLFH
Sbjct: 230 ARLIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFH 289

Query: 750 PGAFWRLCGRI 782
            GAFWRLCGRI
Sbjct: 290 EGAFWRLCGRI 300


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