BLASTX nr result

ID: Glycyrrhiza23_contig00023409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023409
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4...    86   2e-15
ref|XP_003627885.1| U-box domain-containing protein [Medicago tr...    69   5e-10
ref|XP_003546711.1| PREDICTED: U-box domain-containing protein 1...    65   7e-09
ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...    64   1e-08
ref|XP_003542817.1| PREDICTED: U-box domain-containing protein 1...    63   3e-08

>ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 325

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = +2

Query: 149 MDTKVLTIRTLVSSLSSPSDHTXXXXXXXXXXISNQDPSSRPLIAANFSAIPLIAASLYS 328
           MDTK+LTIRTLVSSLSS SD T           S +DP++RPLI+A   A+PL+A++LYS
Sbjct: 1   MDTKLLTIRTLVSSLSSSSDQTRLAALRHLRRTSAEDPAARPLISA-AGAVPLLASALYS 59

Query: 329 ASHPIQEHASATLLN 373
            SHPIQ+HA+ATLLN
Sbjct: 60  PSHPIQDHAAATLLN 74


>ref|XP_003627885.1| U-box domain-containing protein [Medicago truncatula]
           gi|355521907|gb|AET02361.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 372

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = +2

Query: 149 MDTKVLTIRTLVSSLSSPSDHTXXXXXXXXXXISNQDPSSRPLIAANFSAIPLIAASLYS 328
           MD     +RTLVS LSS S+ T          +S QDPS+RP+IA +  AIP +A +LYS
Sbjct: 1   MDANRRVVRTLVSKLSSVSEKTRIESLIELRQLSKQDPSTRPIIAES-GAIPYLAETLYS 59

Query: 329 ASHPIQEHASATLLN 373
           + HP QE+A+ATLLN
Sbjct: 60  SLHPSQENATATLLN 74


>ref|XP_003546711.1| PREDICTED: U-box domain-containing protein 11-like [Glycine max]
          Length = 325

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/75 (49%), Positives = 48/75 (64%)
 Frame = +2

Query: 149 MDTKVLTIRTLVSSLSSPSDHTXXXXXXXXXXISNQDPSSRPLIAANFSAIPLIAASLYS 328
           M+T   TIR+LVS LSS S+            +S Q P +RPLIA +  AIP +A +LY 
Sbjct: 1   METNPRTIRSLVSKLSSVSEAARVDALSQLRLMSKQSPETRPLIA-DAGAIPFVAETLYC 59

Query: 329 ASHPIQEHASATLLN 373
           +SHP QE+A+ATLLN
Sbjct: 60  SSHPPQENAAATLLN 74


>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 310

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/75 (49%), Positives = 47/75 (62%)
 Frame = +2

Query: 149 MDTKVLTIRTLVSSLSSPSDHTXXXXXXXXXXISNQDPSSRPLIAANFSAIPLIAASLYS 328
           M+ K  T R+LVS LSS S+ T          I+  DP SRP+IA    AIP +A +LYS
Sbjct: 1   MEVKRRTARSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIA-ECGAIPYLAETLYS 59

Query: 329 ASHPIQEHASATLLN 373
           +SH  QE+A+ATLLN
Sbjct: 60  SSHTAQENAAATLLN 74


>ref|XP_003542817.1| PREDICTED: U-box domain-containing protein 11-like [Glycine max]
          Length = 326

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/75 (49%), Positives = 45/75 (60%)
 Frame = +2

Query: 149 MDTKVLTIRTLVSSLSSPSDHTXXXXXXXXXXISNQDPSSRPLIAANFSAIPLIAASLYS 328
           MD    TIR+LVS LSS S+            +S Q P +RP+IA    AIP IA +LYS
Sbjct: 1   MDPNPRTIRSLVSKLSSVSEAARIDALSQLRLMSKQSPETRPIIA-QAGAIPYIAETLYS 59

Query: 329 ASHPIQEHASATLLN 373
           +SHP QE A+ TLLN
Sbjct: 60  SSHPSQEDAATTLLN 74


Top