BLASTX nr result

ID: Glycyrrhiza23_contig00023401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023401
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   404   e-110
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   402   e-110
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   379   e-103
ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              371   e-100

>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  404 bits (1039), Expect = e-110
 Identities = 212/248 (85%), Positives = 220/248 (88%)
 Frame = -3

Query: 867  QKLLGLLNDAALVXXXXXXXXXXXXXXXXXXNDRSSAEVLTSSEKQVAYHTCVALRQYFR 688
            QKLLGLLNDAA V                  NDRSSAEVLTSSEKQ+AYHTCVALRQYFR
Sbjct: 671  QKLLGLLNDAASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFR 730

Query: 687  AHLLLLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 508
            AHLL+L+DSIRPNKSNRSAARNIPS+RA YKPLDISNEAMDAVFLQLQKDRKLGPAFVRT
Sbjct: 731  AHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 790

Query: 507  RWPAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLS 328
            RW AVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVN TLS
Sbjct: 791  RWLAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLS 850

Query: 327  NDRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQFASSQT 148
            N+RVGIAVILDAANIAS+HVDPEIIQPALNVLVNLVCPPPSISNKP + +QGQQFASSQT
Sbjct: 851  NNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMFAQGQQFASSQT 910

Query: 147  SIGPPSEA 124
            SI   S A
Sbjct: 911  SIDRGSAA 918


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  402 bits (1032), Expect = e-110
 Identities = 209/241 (86%), Positives = 217/241 (90%)
 Frame = -3

Query: 867  QKLLGLLNDAALVXXXXXXXXXXXXXXXXXXNDRSSAEVLTSSEKQVAYHTCVALRQYFR 688
            QKLLGLLNDAA V                  NDRSSAEVLTSSEKQ+AYHTCVALRQYFR
Sbjct: 682  QKLLGLLNDAASVRSGVNSGALNLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFR 741

Query: 687  AHLLLLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 508
            AHLL+L+DSIRPNKSNRSAARNIPS+RA YKPLDISNEAMDAVFLQLQKDRKLGPAFVRT
Sbjct: 742  AHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 801

Query: 507  RWPAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLS 328
            RW AVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVN TLS
Sbjct: 802  RWLAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLS 861

Query: 327  NDRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQFASSQT 148
            N+RVGIAVILDAANIAS+HVDPEIIQPALNVLVNLVCPPPSISNKP +V+QGQQ ASSQT
Sbjct: 862  NNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQT 921

Query: 147  S 145
            S
Sbjct: 922  S 922


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  379 bits (974), Expect = e-103
 Identities = 200/249 (80%), Positives = 213/249 (85%)
 Frame = -3

Query: 867  QKLLGLLNDAALVXXXXXXXXXXXXXXXXXXNDRSSAEVLTSSEKQVAYHTCVALRQYFR 688
            QKLL LL+DAA V                  NDRS  EVLTSSEKQ+AYHTCVALRQYFR
Sbjct: 817  QKLLSLLHDAASVRSGVNSGGLGLSNSGSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFR 876

Query: 687  AHLLLLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 508
            AHLLLL+DSIRPNK+NRSAARN+PS+RAAYKPLD+SNEAMDAVFLQLQKDRKLGPAFVR 
Sbjct: 877  AHLLLLVDSIRPNKNNRSAARNLPSVRAAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRA 936

Query: 507  RWPAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLS 328
            RW AV+KFL SNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVP SRK+IVN TLS
Sbjct: 937  RWLAVDKFLTSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLS 996

Query: 327  NDRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQFASSQT 148
            N+RVGIAVILDAAN  +S VDPEIIQPALNVLVNLVCPPPSIS KPPV++QGQQ AS QT
Sbjct: 997  NNRVGIAVILDAAN-GASFVDPEIIQPALNVLVNLVCPPPSISLKPPVLAQGQQSASVQT 1055

Query: 147  SIGPPSEAR 121
            S GP  EAR
Sbjct: 1056 SNGPAMEAR 1064


>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
            predicted protein [Populus trichocarpa]
          Length = 1791

 Score =  379 bits (974), Expect = e-103
 Identities = 198/268 (73%), Positives = 221/268 (82%), Gaps = 3/268 (1%)
 Frame = -3

Query: 864  KLLGLLNDAALVXXXXXXXXXXXXXXXXXXNDRSSAEVLTSSEKQVAYHTCVALRQYFRA 685
            KLL LLNDAA V                  NDRSSAEVLTSSEKQ+AYHTCVALRQYFRA
Sbjct: 613  KLLTLLNDAASVRSGVNSGALNLSNSTALRNDRSSAEVLTSSEKQIAYHTCVALRQYFRA 672

Query: 684  HLLLLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTR 505
            HLLLL+DSIRPNK+NR+ ARN+PS+RAAYKPLDISNEAMDAVFLQLQKDRKLG AFVRTR
Sbjct: 673  HLLLLVDSIRPNKNNRNVARNVPSVRAAYKPLDISNEAMDAVFLQLQKDRKLGSAFVRTR 732

Query: 504  WPAVEKFLASNGHITMLELCQAPP-VERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLS 328
            +PAV+KFL  NGH+TMLELCQAPP VERYLHDLLQYA GVLHIVTLV  SRKMIVN TLS
Sbjct: 733  FPAVDKFLGFNGHVTMLELCQAPPIVERYLHDLLQYAFGVLHIVTLVNDSRKMIVNATLS 792

Query: 327  NDRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQFASSQT 148
            N+RVGIA+ILDAANI+S++VDPEIIQPALNVL+NLVCPPPSISNKPP+++ GQQ  S Q+
Sbjct: 793  NNRVGIAIILDAANISSNYVDPEIIQPALNVLINLVCPPPSISNKPPLIAPGQQSVSGQS 852

Query: 147  S--IGPPSEARDRNAERSNTDRAVQVSS 70
            S  +  P +   RN E S  DR++ V S
Sbjct: 853  SNPVQMPGQTEQRNGESSAVDRSIAVGS 880


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  371 bits (952), Expect = e-100
 Identities = 195/241 (80%), Positives = 208/241 (86%)
 Frame = -3

Query: 867  QKLLGLLNDAALVXXXXXXXXXXXXXXXXXXNDRSSAEVLTSSEKQVAYHTCVALRQYFR 688
            QKLL LL+DAA V                  NDRS  EVLTSSEKQ+AYHTCVALRQYFR
Sbjct: 661  QKLLSLLHDAASVRSGVNSGGLGLSNSGSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFR 720

Query: 687  AHLLLLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRT 508
            AHLLLL+DSIRPNK+NRSAARN+PS+RAAYKPLD+SNEAMDAVFLQLQKDRKLGPAFVR 
Sbjct: 721  AHLLLLVDSIRPNKNNRSAARNLPSVRAAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRA 780

Query: 507  RWPAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLS 328
            RW AV+KFL SNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVP SRK+IVN TLS
Sbjct: 781  RWLAVDKFLTSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLS 840

Query: 327  NDRVGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQFASSQT 148
            N+RVGIAVILDAAN  +S VDPEIIQPALNVLVNLVCPPPSIS KPPV++QGQQ AS QT
Sbjct: 841  NNRVGIAVILDAAN-GASFVDPEIIQPALNVLVNLVCPPPSISLKPPVLAQGQQSASVQT 899

Query: 147  S 145
            S
Sbjct: 900  S 900


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