BLASTX nr result

ID: Glycyrrhiza23_contig00023384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023384
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802...   138   4e-31
ref|XP_003541303.1| PREDICTED: uncharacterized protein LOC100782...   131   5e-29
ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4...   131   6e-29
gb|AFK44935.1| unknown [Medicago truncatula]                          127   9e-28
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...   122   3e-26

>ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802173 [Glycine max]
          Length = 298

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/81 (81%), Positives = 74/81 (91%)
 Frame = +2

Query: 17  CKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKHCCTIGE 196
           C+LN+L SG MGKMLVYKSGAIKLKLGNTLYDVSSGMNC  AQD+VAVNTAQKHCCTIGE
Sbjct: 218 CELNELSSGFMGKMLVYKSGAIKLKLGNTLYDVSSGMNCACAQDLVAVNTAQKHCCTIGE 277

Query: 197 ITKQATITPNVDAIVECLADL 259
           I+K  TITP+VDAI++ L+DL
Sbjct: 278 ISKHVTITPDVDAIIDNLSDL 298


>ref|XP_003541303.1| PREDICTED: uncharacterized protein LOC100782982 [Glycine max]
          Length = 302

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/81 (75%), Positives = 73/81 (90%)
 Frame = +2

Query: 17  CKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKHCCTIGE 196
           C+LN+L SG MGKMLVYKSGAIKLKLG+TLYDVSSGM C  AQD+VA+NTAQKHCCTIGE
Sbjct: 222 CELNELSSGFMGKMLVYKSGAIKLKLGDTLYDVSSGMKCACAQDLVAINTAQKHCCTIGE 281

Query: 197 ITKQATITPNVDAIVECLADL 259
           I+K+ +ITP++DAI++ L DL
Sbjct: 282 ISKRVSITPDIDAIIDNLPDL 302


>ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4 [Medicago truncatula]
           gi|355480022|gb|AES61225.1| DNA-directed RNA polymerase
           III subunit RPC4 [Medicago truncatula]
          Length = 288

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/85 (70%), Positives = 72/85 (84%)
 Frame = +2

Query: 5   AGKPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKHCC 184
           A K C+LNDLP GL+GKMLVYKSG +KLKLGNTLYDVSSGMNC FAQ+  A+NTAQK C 
Sbjct: 202 AAKLCRLNDLPPGLIGKMLVYKSGKVKLKLGNTLYDVSSGMNCIFAQEFAAINTAQKFCS 261

Query: 185 TIGEITKQATITPNVDAIVECLADL 259
            +GEI K AT+TP++DA ++CL+DL
Sbjct: 262 ALGEINKFATVTPDIDAALDCLSDL 286


>gb|AFK44935.1| unknown [Medicago truncatula]
          Length = 288

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = +2

Query: 5   AGKPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKHCC 184
           A K C+LNDLP GL+GKMLVYKSG +KLKLGNTLYDVSSGMNC FAQ+  A+NTAQK C 
Sbjct: 202 AAKLCRLNDLPPGLIGKMLVYKSGKVKLKLGNTLYDVSSGMNCIFAQEFAAINTAQKFCS 261

Query: 185 TIGEITKQATITPNVDAIVECLADL 259
            +GEI K AT+T ++DA ++CL+DL
Sbjct: 262 ALGEINKFATVTLDIDAALDCLSDL 286


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
           gi|223544779|gb|EEF46295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 286

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/83 (65%), Positives = 70/83 (84%)
 Frame = +2

Query: 11  KPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKHCCTI 190
           K CKL++LP+G MGKMLVY+SGA+KLKLG+TLYDVS G++  FAQD+ A+NTA+KHCC +
Sbjct: 204 KTCKLDELPAGHMGKMLVYRSGAVKLKLGDTLYDVSPGLDFAFAQDIAAINTAEKHCCVV 263

Query: 191 GEITKQATITPNVDAIVECLADL 259
            EI K A +TP+VDAI+  +ADL
Sbjct: 264 AEIDKHAIVTPDVDAIINSMADL 286


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