BLASTX nr result

ID: Glycyrrhiza23_contig00023382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023382
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago trun...   261   2e-67
ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799...   253   4e-65
ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806...   236   8e-60
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   197   4e-48
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   189   9e-46

>ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
            gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1
            [Medicago truncatula]
          Length = 1370

 Score =  261 bits (667), Expect = 2e-67
 Identities = 129/147 (87%), Positives = 139/147 (94%)
 Frame = -1

Query: 973  KGSYSYRLPADDVLPGGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQAR 794
            KGSYSYRLPADD+L GG GPKTNVDSLQNTI+ STLLGSIM FIPLSR+EYELLEA+QAR
Sbjct: 1224 KGSYSYRLPADDLLSGGIGPKTNVDSLQNTILVSTLLGSIMIFIPLSREEYELLEAVQAR 1283

Query: 793  LVLHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVK 614
            L +HHLTAPVLGNDHNEFRSRENPVG PKILDGDMLTQFLELT+MQQN ILS+EP D+VK
Sbjct: 1284 LAVHHLTAPVLGNDHNEFRSRENPVGTPKILDGDMLTQFLELTNMQQNNILSMEPLDVVK 1343

Query: 613  PSLKPILPKFSVNQVVQLLERVHYALN 533
            PSLKP+LP+FSVNQVVQLLERVHYALN
Sbjct: 1344 PSLKPLLPQFSVNQVVQLLERVHYALN 1370


>ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  253 bits (647), Expect = 4e-65
 Identities = 131/148 (88%), Positives = 137/148 (92%), Gaps = 1/148 (0%)
 Frame = -1

Query: 973  KGSYSYRLPADDVLPGGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQAR 794
            KGSYSYRLPADDVL GGNGPKTNVDSLQNTIIASTLLGSIM FIPLSR+EYELLE +QAR
Sbjct: 1111 KGSYSYRLPADDVLEGGNGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEVVQAR 1170

Query: 793  LVLHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVK 614
            LV+HHLTAPVLGNDH+EFRSREN VGVPKILDGD+LTQFLELTSMQQ  ILSLE PDMVK
Sbjct: 1171 LVVHHLTAPVLGNDHHEFRSRENRVGVPKILDGDILTQFLELTSMQQKMILSLEQPDMVK 1230

Query: 613  PSLKPILPK-FSVNQVVQLLERVHYALN 533
            PSLKP+LP   SVNQVVQLLERVH ALN
Sbjct: 1231 PSLKPLLPSHVSVNQVVQLLERVHDALN 1258


>ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  236 bits (601), Expect = 8e-60
 Identities = 121/135 (89%), Positives = 126/135 (93%), Gaps = 1/135 (0%)
 Frame = -1

Query: 973  KGSYSYRLPADDVLPGGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQAR 794
            KGSYSYRLPADDVL GGNGPKTNVDSLQNTIIA+TLLGSIM FIPLSR+EYELLEA+QAR
Sbjct: 1117 KGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIATTLLGSIMIFIPLSREEYELLEAVQAR 1176

Query: 793  LVLHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVK 614
            LV+HHLTAPVLGNDHNEFRSREN VGVPKILDGDMLTQFLELTSMQQ  ILSLE PDMVK
Sbjct: 1177 LVVHHLTAPVLGNDHNEFRSRENRVGVPKILDGDMLTQFLELTSMQQKMILSLELPDMVK 1236

Query: 613  PSLKPILPK-FSVNQ 572
            PSLKP+LP   SVNQ
Sbjct: 1237 PSLKPLLPSHVSVNQ 1251


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  197 bits (500), Expect = 4e-48
 Identities = 101/149 (67%), Positives = 120/149 (80%), Gaps = 2/149 (1%)
 Frame = -1

Query: 973  KGSYSYRLPADDVLPGGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQAR 794
            KGS+SY+LPADD+L G   P ++ DS  NTIIASTLLGSI+ F PLSRDEYELLEA+QA+
Sbjct: 1228 KGSFSYKLPADDLLRGCAVPGSDFDSSHNTIIASTLLGSIVIFTPLSRDEYELLEAVQAK 1287

Query: 793  LVLHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDM-- 620
            L +H LT+P+LGNDH E+RSRENP+GVPKILDGD+LTQFLELTSMQQ  +LS     +  
Sbjct: 1288 LAVHPLTSPILGNDHYEYRSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVGSLSA 1347

Query: 619  VKPSLKPILPKFSVNQVVQLLERVHYALN 533
            VKPS K +     +NQVVQLLER+HYALN
Sbjct: 1348 VKPSSKSMPASIPINQVVQLLERIHYALN 1376


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  189 bits (480), Expect = 9e-46
 Identities = 98/150 (65%), Positives = 118/150 (78%), Gaps = 3/150 (2%)
 Frame = -1

Query: 973  KGSYSYRLPADDVLPGGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQAR 794
            KGS+SY+LPADDVL G +G  T +D  +N+I+A TLLGSI+  IP+SR+E+ELLEA+QAR
Sbjct: 1238 KGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPISREEHELLEAVQAR 1297

Query: 793  LVLHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSL---EPPD 623
            L +H LTAP+LGNDHNEFRSREN  GV KILDGDML QFLELTSMQQ A+L+L       
Sbjct: 1298 LAVHQLTAPILGNDHNEFRSRENSAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLET 1357

Query: 622  MVKPSLKPILPKFSVNQVVQLLERVHYALN 533
            +   S + +L   SVN+VVQLLERVHYALN
Sbjct: 1358 VTSSSKQTLLSPISVNRVVQLLERVHYALN 1387


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