BLASTX nr result

ID: Glycyrrhiza23_contig00023378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023378
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    99   4e-19
ref|XP_003608299.1| F-box family protein [Medicago truncatula] g...    96   2e-18
ref|XP_003606071.1| F-box family protein [Medicago truncatula] g...    96   2e-18
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    93   2e-17
ref|XP_003608302.1| hypothetical protein MTR_4g092390 [Medicago ...    92   4e-17

>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/92 (55%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = +2

Query: 5   AEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMVPDLLEVKLPSMCYLKSLKVK 184
           AEM+S + + PL+L  WL  LA +KSL V++TTL+IL +VPDLLEVKLPS+C LKS+++K
Sbjct: 291 AEMFSRWDEPPLILFDWLLNLANVKSLMVSSTTLRILSLVPDLLEVKLPSLCNLKSMEIK 350

Query: 185 PEPLSDMFA--TILRDIKLKQAVAKSRKEAAK 274
            E  S+  A   ++++  LK+A AKSRKEAAK
Sbjct: 351 LETCSNQMALPNLVKEAMLKKAAAKSRKEAAK 382


>ref|XP_003608299.1| F-box family protein [Medicago truncatula]
           gi|355509354|gb|AES90496.1| F-box family protein
           [Medicago truncatula]
          Length = 405

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +2

Query: 5   AEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMVPDLLEVKLPSMCYLKSLKVK 184
           A M ++  K P+VL +WLQEL  +KSL V++ TLQIL +VPDLLEVKLPS+C LK +++K
Sbjct: 282 ARMDTSLEKLPMVLFNWLQELLAVKSLKVSSITLQILSLVPDLLEVKLPSLCNLKLVEIK 341

Query: 185 PEPLSDMFATILRDIKLKQAVAKSRKEAA 271
            +PLS   + IL+D  L +A AKS +EAA
Sbjct: 342 MQPLSFALSCILKDAMLMKAAAKSPEEAA 370


>ref|XP_003606071.1| F-box family protein [Medicago truncatula]
           gi|355507126|gb|AES88268.1| F-box family protein
           [Medicago truncatula]
          Length = 428

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +2

Query: 5   AEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMVPDLLEVKLPSMCYLKSLKVK 184
           A M ++  K P+VL +WLQEL  +KSL V++ TLQIL +VPDLLEVKLPS+C LK +++K
Sbjct: 305 ARMDTSLEKLPMVLFNWLQELLAVKSLKVSSITLQILSLVPDLLEVKLPSLCNLKLVEIK 364

Query: 185 PEPLSDMFATILRDIKLKQAVAKSRKEAA 271
            +PLS   + IL+D  L +A AKS +EAA
Sbjct: 365 MQPLSFALSCILKDAMLMKAAAKSPEEAA 393


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/90 (54%), Positives = 67/90 (74%)
 Frame = +2

Query: 2   DAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMVPDLLEVKLPSMCYLKSLKV 181
           DAEM SNY + PLVLLSWL ELA IKSLTV+ +TLQ+L ++PDLL+ KL S+C LKSL+V
Sbjct: 281 DAEMLSNYTEPPLVLLSWLLELANIKSLTVSASTLQVLSLIPDLLKDKLTSLCNLKSLRV 340

Query: 182 KPEPLSDMFATILRDIKLKQAVAKSRKEAA 271
           + +PLS   +  LR  KL++ V   ++ ++
Sbjct: 341 QLKPLSYGLSMTLRTAKLQKEVKAGQEPSS 370


>ref|XP_003608302.1| hypothetical protein MTR_4g092390 [Medicago truncatula]
           gi|355509357|gb|AES90499.1| hypothetical protein
           MTR_4g092390 [Medicago truncatula]
          Length = 174

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +2

Query: 5   AEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMVPDLLEVKLPSMCYLKSLKVK 184
           A M+S   K P+VL +WL+E   +KSL V++TTLQIL +VPDLLEV+LPS   LKS+++K
Sbjct: 46  AVMYSIGDKAPMVLFNWLREFTNVKSLIVSSTTLQILSLVPDLLEVELPSFGNLKSMEIK 105

Query: 185 PEPLSDMFAT--ILRDIKLKQAVAKSRKEAAK 274
            EP+        IL+D  LK+A+A SRKEAAK
Sbjct: 106 LEPIEVQLGLPFILKDAMLKRAIATSRKEAAK 137


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