BLASTX nr result

ID: Glycyrrhiza23_contig00023346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023346
         (1492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23309.3| unnamed protein product [Vitis vinifera]              312   2e-82
ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleop...   311   4e-82
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   298   3e-78
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   280   7e-73
ref|XP_004158025.1| PREDICTED: heterogeneous nuclear ribonucleop...   264   5e-68

>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  312 bits (799), Expect = 2e-82
 Identities = 200/433 (46%), Positives = 247/433 (57%), Gaps = 33/433 (7%)
 Frame = -2

Query: 1491 KTTWAEKWVKDHPEKRYVLLGTNLILDQMKVPGLMRKSNYGERFDRLMDRATGIFNTVLS 1312
            K+TWAEKWVK+H EKRYVLLGTNL LDQMKVPGL+RK NYGERF+RLMDRATGIFNT+LS
Sbjct: 270  KSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLS 329

Query: 1311 RAAKIPHNYIIDQTNVYKSARKRKLKPFAFYHKIAVVVFPRPEELKIRSEKRFKEMGKEV 1132
            RA+K PHNYIIDQTNVYK+ARKRKLKPFA + KIAVV+FP+PEELK R+EKRFKEMGKEV
Sbjct: 330  RASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEV 389

Query: 1131 PPDAVNNMIANFVLPKSKDMPLSDEYFDEVMFVELDQNESQKYLDQMKQ--GCAXXXXXX 958
            P DAVN MIAN+VLP+SKDMP SDE FD+V+F EL++ E+QK L++MK+  G A      
Sbjct: 390  PADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPELNRGEAQKCLEEMKRALGTASHLNLK 449

Query: 957  XXXXXXXXXXXXXXXSALQEQRRLTSSSCIHWGDSHSPISPSNYGI--PNQVSADGHMTL 784
                           ++   Q +   S       S+ P  P NY    P  +++      
Sbjct: 450  SNFSPYSQESSLQSYNSSSLQNQGAPSVPDERSLSYHPPLPQNYYYQRPAHMNSGHQGVA 509

Query: 783  PNGRMNSLSGVYPSSQVSHVSR-APSPWGL-YSNNESSRFPRDD---AGYNRTYGVIPMG 619
             +GR+      Y  +Q   + R AP    L YS N  SR   +     GY+ + G IP  
Sbjct: 510  LHGRVEPFPRAYQDNQNPFMPRDAPYETSLGYSRNFLSRNDSNSYGTYGYDNSRGSIPGV 569

Query: 618  DIEAY-SNSVVGGQYRPNAVGNNLV---FHDPYRSGMNE-------------PSPIASER 490
             + +Y S  +V    R N    N +     DPY SGM E              +   S R
Sbjct: 570  GMASYQSFGMVDPYRRTNLESRNPIPMGATDPYVSGMVESHDKYNVEGVNHYETQAESMR 629

Query: 489  TMYYDYSAQGRPYSDNRGF-------RPDLHXXXXXXXXXXXXYGTPIPRPPYGGLPDNM 331
            T  + ++  G   S   GF       R   +            YG P+ RP YG  P +M
Sbjct: 630  TSLFSHNTLGGHGSVPGGFGANQLVPRDPRNLPTPSQMSYGSPYGAPLVRPSYGNFPTDM 689

Query: 330  QYPGRYASQHPRY 292
            Q+PG YA   PRY
Sbjct: 690  QHPGGYAPPRPRY 702


>ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Glycine max]
          Length = 517

 Score =  311 bits (796), Expect = 4e-82
 Identities = 161/240 (67%), Positives = 181/240 (75%), Gaps = 11/240 (4%)
 Frame = -2

Query: 1491 KTTWAEKWVKDHPEKRYVLLGTNLILDQMKVPGLMRKSNYGERFDRLMDRATGIFNTVLS 1312
            KTTWAEKWVKDHPEKRYVLLGTN ILDQMKVPGL+R++NYGERFD LMDRAT IFN +LS
Sbjct: 273  KTTWAEKWVKDHPEKRYVLLGTNSILDQMKVPGLLRRNNYGERFDLLMDRATRIFNILLS 332

Query: 1311 RAAKIPHNYIIDQTNVYKSARKRKLKPFAFYHKIAVVVFPRPEELKIRSEKRFKEMGKEV 1132
            RAA IP NYIIDQTNVYKSARKRKL+PFA Y KIAVVVFP+P+ELKIRS+KRF EMGKEV
Sbjct: 333  RAANIPRNYIIDQTNVYKSARKRKLEPFADYQKIAVVVFPKPDELKIRSDKRFTEMGKEV 392

Query: 1131 PPDAVNNMIANFVLPKSKDMPLSDEYFDEVMFVELDQNESQKYLDQMKQGCAXXXXXXXX 952
            PPDAVN MIAN+VLPKSKDMP SDE+FD+VMFVEL++ ESQKYLDQMKQ  A        
Sbjct: 393  PPDAVNKMIANYVLPKSKDMPRSDEFFDQVMFVELNRGESQKYLDQMKQNLAYISSNNSS 452

Query: 951  XXXXXXXXXXXXXSA---LQEQRRLTSSSCIHWGD--------SHSPISPSNYGIPNQVS 805
                              L     L  ++ +H+G         S+SPI+P NYG+P QVS
Sbjct: 453  TLPPGGSFESFAVLLFNDLNNNALLVKTTTMHFGSGSGLHQPGSYSPIAPPNYGMPGQVS 512


>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  298 bits (762), Expect = 3e-78
 Identities = 195/424 (45%), Positives = 240/424 (56%), Gaps = 33/424 (7%)
 Frame = -2

Query: 1491 KTTWAEKWVKDHPEKRYVLLGTNLILDQMKVPGLMRKSNYGERFDRLMDRATGIFNTVLS 1312
            K+TWAEKWVK+H EKRYVLLGTNL LDQMKVPGL+RK NYGERF+RLMDRATGIFNT+LS
Sbjct: 437  KSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLS 496

Query: 1311 RAAKIPHNYIIDQTNVYKSARKRKLKPFAFYHKIAVVVFPRPEELKIRSEKRFKEMGKEV 1132
            RA+K PHNYIIDQTNVYK+ARKRKLKPFA + KIAVV+FP+PEELK R+EKRFKEMGKEV
Sbjct: 497  RASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEV 556

Query: 1131 PPDAVNNMIANFVLPKSKDMPLSDEYFDEVMFVELDQNESQKYLDQMKQ--GCAXXXXXX 958
            P DAVN MIAN+VLP SKDMP SDE FD+V+F EL++  +QK L++MK+  G A      
Sbjct: 557  PADAVNEMIANYVLPGSKDMPGSDEDFDQVLFPELNRGXAQKCLEEMKRALGTASHLNLK 616

Query: 957  XXXXXXXXXXXXXXXSALQEQRRLTSSSCIHWGDSHSPISPSNYGI--PNQVSADGHMTL 784
                           ++   Q +   S       S+ P  P NY    P  +++      
Sbjct: 617  SNFSXYSQESSLQSYNSSSLQNQGAPSVPDERSLSYHPPLPQNYYYQRPAHMNSGHQGVA 676

Query: 783  PNGRMNSLSGVYPSSQVSHVSR-APSPWGL-YSNNESSRFPRDD---AGYNRTYGVIPMG 619
             +GR+      Y  +Q   + R AP    L YS N  SR   +     GY+ + G IP  
Sbjct: 677  LHGRVEPFPRAYQDNQNPFMPRDAPYETSLGYSRNFLSRNDSNSYGTYGYDNSRGSIPGV 736

Query: 618  DIEAY-SNSVVGGQYRPNAVGNNLVF---HDPYRSGMNE-------------PSPIASER 490
             + +Y S  +V    R N    N +     DPY SGM E              +   S R
Sbjct: 737  GMASYQSFGMVDPYRRTNLESRNPIXMGATDPYVSGMVESHDKYNVEGVNHYETQAESMR 796

Query: 489  TMYYDYSAQGRPYSDNRGF-------RPDLHXXXXXXXXXXXXYGTPIPRPPYGGLPDNM 331
            T  + ++  G   S   GF       R                YG P+ RP YG  P +M
Sbjct: 797  TSLFSHNTLGGHGSVPGGFGANQLVPRDPRXLPTPSQMSYGSPYGAPLVRPSYGNFPTDM 856

Query: 330  QYPG 319
            Q+PG
Sbjct: 857  QHPG 860


>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Vitis vinifera]
          Length = 514

 Score =  280 bits (716), Expect = 7e-73
 Identities = 134/169 (79%), Positives = 155/169 (91%)
 Frame = -2

Query: 1491 KTTWAEKWVKDHPEKRYVLLGTNLILDQMKVPGLMRKSNYGERFDRLMDRATGIFNTVLS 1312
            K+TWAEKWVK+H EKRYVLLGTNL LDQMKVPGL+RK NYGERF+RLMDRATGIFNT+LS
Sbjct: 270  KSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLS 329

Query: 1311 RAAKIPHNYIIDQTNVYKSARKRKLKPFAFYHKIAVVVFPRPEELKIRSEKRFKEMGKEV 1132
            RA+K PHNYIIDQTNVYK+ARKRKLKPFA + KIAVV+FP+PEELK R+EKRFKEMGKEV
Sbjct: 330  RASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEV 389

Query: 1131 PPDAVNNMIANFVLPKSKDMPLSDEYFDEVMFVELDQNESQKYLDQMKQ 985
            P DAVN MIAN+VLP+SKDMP SDE FD+V+F EL++ E+QK L++MK+
Sbjct: 390  PADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPELNRGEAQKCLEEMKR 438


>ref|XP_004158025.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Cucumis sativus]
          Length = 595

 Score =  264 bits (674), Expect = 5e-68
 Identities = 127/169 (75%), Positives = 148/169 (87%)
 Frame = -2

Query: 1491 KTTWAEKWVKDHPEKRYVLLGTNLILDQMKVPGLMRKSNYGERFDRLMDRATGIFNTVLS 1312
            K+TWA+KW  DHPEKR +LLGTNLILDQMK+PGL+RK NYGERFDRLMD+AT IFN +LS
Sbjct: 270  KSTWAKKWADDHPEKRQILLGTNLILDQMKLPGLLRKHNYGERFDRLMDQATEIFNILLS 329

Query: 1311 RAAKIPHNYIIDQTNVYKSARKRKLKPFAFYHKIAVVVFPRPEELKIRSEKRFKEMGKEV 1132
            RAA +P NYIIDQTNVYK ARKRKLKPFA + KIAVVVFP+PEEL+ RS +RF+EMGKEV
Sbjct: 330  RAAAVPRNYIIDQTNVYKHARKRKLKPFADFQKIAVVVFPKPEELQRRSAERFREMGKEV 389

Query: 1131 PPDAVNNMIANFVLPKSKDMPLSDEYFDEVMFVELDQNESQKYLDQMKQ 985
            P DAVN M+AN++LP SKD+P S EYFDEV+FVELD+ ESQ+ LD MK+
Sbjct: 390  PADAVNKMLANYILPTSKDIPGSGEYFDEVIFVELDRPESQRCLDAMKR 438


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