BLASTX nr result

ID: Glycyrrhiza23_contig00023344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00023344
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47046.1| unknown [Lotus japonicus]                              128   4e-28
ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   109   3e-22
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...    76   2e-12
ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/71 (84%), Positives = 67/71 (94%)
 Frame = -3

Query: 215 EMKEKDICNGATFTIRLNAYVSARDIEGMEKLLMQIEADPIATVDWYTYSTAANGYVKAG 36
           EMKE D+CNGATFTIRLNAYV+A+D+EGMEKLLMQ+EADP+ATVDWYTYSTAANGY+KAG
Sbjct: 195 EMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAG 254

Query: 35  NAGKALAMLKK 3
           N  KALA LKK
Sbjct: 255 NVEKALAALKK 265


>ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Glycine max]
          Length = 483

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/71 (76%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 EMKEKDICNGATFTIRLNAYVSARDIEGMEKLLMQIEADPIATVDWYTYSTAANGYVKAG 36
           EMKEKDICN  T+TIRLNAYV A DI+GMEKLLMQ+E DP+ATVDWYTY TAANGY K  
Sbjct: 183 EMKEKDICNAGTYTIRLNAYVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVH 242

Query: 35  NAGKALAMLKK 3
           N  K  AMLKK
Sbjct: 243 NFEKVAAMLKK 253


>ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20710, mitochondrial-like [Glycine max]
          Length = 482

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 EMKEKDICNGATFTIRLNAYVSARDIEGMEKLLMQIEADPIATVDWYTYSTAANGYVKAG 36
           EMKEKDICN +T+TIRLNAYV   DI+GMEKLLMQ+EADP+ATVDWYTY TAANGY +  
Sbjct: 183 EMKEKDICNASTYTIRLNAYVVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRVH 242

Query: 35  NAGKALAMLKK 3
           N  K   MLKK
Sbjct: 243 NFEKVAEMLKK 253


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -3

Query: 215 EMKEKDI-CNGATFTIRLNAYVSARDIEGMEKLLMQIEADPIATVDWYTYSTAANGYVKA 39
           EM+E  I C+  T+ IRLNA V++ DIEGMEKLLM++E DP  +V ++ Y  AANGY+KA
Sbjct: 200 EMEENGISCDRITYCIRLNACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKA 259

Query: 38  GNAGKALAMLKK 3
           G   K L MLK+
Sbjct: 260 GLVDKTLIMLKR 271


>ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|222872228|gb|EEF09359.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = -3

Query: 215 EMKEKDIC-NGATFTIRLNAYVSARDIEGMEKLLMQIEADPIATVDWYTYSTAANGYVKA 39
           EM++  IC +  T+ I LNAYV+  +IE ++K+LM++EADP+ ++DWY Y  AANGY+KA
Sbjct: 194 EMEKWGICFSNITYKILLNAYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKA 253

Query: 38  GNAGKALAML 9
           G   K L ML
Sbjct: 254 GLIDKTLTML 263


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